Populus euphratica (Euphrates poplar): 105116256
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Entry
105116256 CDS
T05872
Name
(RefSeq) DNA damage-binding protein 1a-like isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03420
Nucleotide excision repair
peu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105116256
09124 Replication and repair
03420 Nucleotide excision repair
105116256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105116256
03400 DNA repair and recombination proteins [BR:
peu03400
]
105116256
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
105116256
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105116256
TCR (transcription coupled repair) factors
Cul4-CSA complex
105116256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
105116256
NCBI-ProteinID:
XP_011011818
UniProt:
A0AAJ6XAL1
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQV
LDIKFLHGCSKPTIVVLYQDNKDARHVKTYEVALKDKDFIEGPWSQNNLDNGADLLIPVP
PPFCGVLIIGEETIVYCSANVFRAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVIT
HEKEKVTGLKIELLGETSIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDAKGSYVEVLD
RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMW
SLRSLTDDPFDTFLVVSFISETRILAMNIEDELEETEIEGFCSQVQTLFCHCAVFNQLVQ
VTSSSVRLVSSTTRELRQEWNAPSGYSINVATANATQVLLATGGGHLVYLEIGDGTLTQA
KHAQLECEISCLDINPIGENPNYSQLAAVGMWTDISVRIFSLPDLNLITKEPLGGEIIPR
SVLLCSFEGISYLLCALGDGHLLNFLLNLSTGELKDRKKVSLGTQPITLRTFSSKNTTHV
FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDIQK
LHIRSIPLGEHARRICHQEQSRTFSICSMKNQSNAEESEMHFIRLLDDQTFEFISTYPLD
TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKG
AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG
DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA
TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH
EQYLFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRM
DEISKAMEISVEELCKRVEELTRLH
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtgtcagaccgtataggtcgcccaacagacaatggtcagattggcataatt
gatcctgattgtagattaattggactccatttgtatgatgggttgtttaaggtcattcct
tttgataataaaggacagctcaaagaggcttttaacataaggcttgaggaacttcaagtt
ttggatatcaaatttcttcatggttgttcaaaaccaacgattgttgttctttaccaggat
aacaaggatgcccgtcatgttaaaacatatgaggttgctttgaaagataaagactttatt
gagggtccttggtcgcagaacaatcttgacaatggtgctgatttgctaataccagttccc
ccacctttctgtggtgttcttattattggagaagaaacaattgtatattgcagcgccaat
gtttttagagcgatcccaatcagaccttctataacgaaagcatatggaagagttgatgct
gatggttctaggtatttacttggtgatcatgctgggcttcttcaccttctagtcataacc
catgagaaagaaaaggtcactggcctcaaaattgagctattgggagaaacttctatcgca
tctaccatatcatatctcgacaatgcttttgtctttattggttcaagctacggagattca
cagcttgtaaagttaaatctgcaacccgatgcaaaaggttcatatgtagaagttctggac
aggtatgtcaatttgggaccaattgttgacttctgtgtggtggacctggagcggcaaggc
caaggtcaggttgtcacttgctctggagcctataaggatggttctcttcggatagttcgt
aatggaataggaatcaatgaacaggcatctgtagagcttcaaggcatcaaaggaatgtgg
tcattaagatctttgactgatgatccatttgacacctttctggttgtaagttttattagc
gagacaagaattttggcaatgaacattgaggatgagttggaggaaactgaaatagagggt
ttctgttcacaagtgcagacattgttctgccattgtgctgtgttcaaccagcttgttcaa
gttacatcaagctctgtaagactggtcagttccacaactagagagctcagacaggaatgg
aatgctccatcaggttattcaataaatgtcgccactgctaatgccacccaggttttattg
gcaactggtggtggccaccttgtctatctggaaatcggtgatgggacactgacacaggca
aaacatgcacagttagagtgtgagatatcatgcctggacattaaccccattggagagaat
cccaactatagtcaactagctgcggttggaatgtggacagacataagtgtcaggatattt
tcattgcctgatctaaatctcataacaaaggagccattgggaggagagataataccccgt
tctgttcttctatgttcctttgaagggatatcgtatttattatgtgcccttggagacgga
cacctcttgaacttcctactgaacttgagtactggcgagttgaaagataggaaaaaggtg
tctttggggacccaacctataacactccgtactttctcatcgaagaataccacacatgta
tttgctgcatcagataggccaactgtcatttacagcagcaacaagaaactactttacagc
aatgtaaacttgaaagaagtcagccatatgtgtccttttaactctgctgcatttccagac
agccttgctattgcaaaagaaggggaacttagcattggcaccattgatgatatccaaaag
cttcacatccgctctattccattgggtgaacatgcacggcgtatatgtcaccaggagcag
tctcggactttctccatttgtagtatgaaaaaccaatccaatgcagaagaatctgaaatg
cattttattcgattgttagatgatcagacctttgagttcatatcaacatacccacttgac
acattcgagtatggctgctccatacttagctgctccttttctgatgatagcaacgtgtac
tattgtgttggaactgcgtatgttttgccagaagaaaacgagccaaccaagggccgaata
ctggttttcatagtggaagatgggaagttgcagcttattgctgagaaggaaacaaagggg
gcagtatactctttgaatgctttcaatggcaaactgctggctgctattaatcaaaagatc
cagttatacaagtggatgctccgagatgatggaacacgtgagctgcagtctgagtgtggg
catcatgggcacatactagccctctatgtacaaactcgtggagatttcattgttgttggt
gatctgatgaagtcaatctccttgctaatctataagcatgaggaaggtgctattgaggag
cgagcccgtgattataatgcaaattggatgtctgcagttgagattcttgatgatgacatt
taccttggtgctgaaaataactttaacctattcacagttcggaaaaatagtgaaggtgcc
actgatgaggaacgaggccgtcttgaggtggtcggtgagtatcaccttggagaatttgta
aatcgattccgacatggttcccttgtcatgcgcttgccagattctgatgttggccagatc
ccaactgtcatttttgggactgttaatggtgtaattggggtcattgcttcacttcctcat
gagcaatacctctttttggagaagctgcagtcaaacttaagaaaggtgataaagggtgtc
ggaggattgagccatgagcaatggagatcattcaacaacgagaagaaaactgtagatgcc
aagaatttcttggatggagatcttattgagtcattccttgatctcagccgtagtcggatg
gatgagatatccaaggcaatggagatctccgtggaggagctttgtaagagagtggaagag
ctgacaaggctgcattga
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