Populus euphratica (Euphrates poplar): 105116257
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Entry
105116257 CDS
T05872
Name
(RefSeq) WD repeat-containing protein 82-like
KO
K14962
COMPASS component SWD2
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105116257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105116257
03036 Chromosome and associated proteins [BR:
peu03036
]
105116257
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105116257
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
105116257
COMPASS/SET1 complex (yeast)
105116257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_RFWD3
WD40_MABP1-WDR62_1st
PQQ_3
NBCH_WD40
Beta-prop_DCAF12
WD_LRWD1
MIOS_WD40
Ge1_WD40
Methyltransf_13
Motif
Other DBs
NCBI-GeneID:
105116257
NCBI-ProteinID:
XP_011011821
UniProt:
A0AAJ6XAW9
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MIGGRGAASVYCFFLFFRRKYQSFFLVQTPSKPDRQTPTISVAMISPTELDDDTVRSMSI
GAVFSDFGGKINSVDFHRKDDLLVTASEDDSVRLYDIASAKLLKTTYHKKHGTDRICFTH
HPSSVICSSVYHLDSTGESLRYLSLYDNRCLRYFKGHKDKVVSLCMSPINDSFMSSSLDH
SIRIWDLRVNACQGILRLRGRPTVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDTFLV
GGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGDKRCGFSLEPSPSTTIEATFTPDG
QYVVSGSGDGTLHAWNINMQNEVSCWNSHIGIALCLKWAPRRAMFVAASTVLTFWIPDSS
KPTVDPRPMDTEGAAPSEHVTQQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgattggaggacgaggagcagcatcagtatattgtttttttttattttttcgtagaaaa
tatcaatcgttcttccttgtccaaactccatcgaaaccagatagacagactccgacaata
tcagtggctatgatatcgcctacagagctcgatgatgatacggtgcgcagtatgtctatc
ggagccgttttctccgactttggagggaagattaattcagttgattttcatcgaaaagat
gatctgttagttacagctagcgaggatgattcggttcgtctttacgacattgcaagtgcc
aaattgctgaagactacttatcacaagaaacacggtacagatcgaatatgtttcacgcat
caccctagctccgttatttgttcctcagtataccatttagattctaccggagaatcatta
cgttatctatcattgtatgataatcgatgtcttcgctacttcaaaggccataaagacaag
gttgtttcgctctgcatgtctccaattaatgatagcttcatgtccagctctcttgaccac
agcattagaatatgggatcttcgcgtaaatgcctgccagggaattttgcgtttacgtggt
agacccacagttgcatatgaccaacaaggtcttgtctttgctgtggcaatggaagggggt
gctattaaactgtttgattcacgatcctatgacaagggtccctttgacacctttttagtt
ggtggagatacagctgaggtttgtgatattaaattcagcaatgatggcaaatcaatgcta
ttgacgaccacgagtaacaacatctatgttcttgatgcatatggtggagataagcgatgt
ggcttcagtttggaaccatctcccagtacaactatagaggctacttttaccccagatggc
caatatgtggtatcaggctcaggagatggaaccttgcatgcctggaacatcaacatgcaa
aatgaggtgtcatgctggaacagtcacataggcattgcattatgcttgaaatgggctcct
cgtcgtgccatgttcgttgctgcctctactgttctaacgttttggatacctgacagctcc
aaaccaactgtcgatcctcgtcccatggacactgaaggtgcagctccatctgaacatgta
actcaacaatga
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