Populus euphratica (Euphrates poplar): 105116385
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Entry
105116385 CDS
T05872
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105116385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105116385
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105116385
mRNA degradation factors
5'-3' decay
Lsm complex
105116385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
105116385
NCBI-ProteinID:
XP_011012019
UniProt:
A0AAJ6XB34
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAGPEDIHLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL
YCDIQLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggcccagaagatatccacctctctacttctcttgccaactatcttgat
aagaagcttcttgtgcttcttcgagatggccgaaagctcatgggattacttcgttctttt
gatcaatttgccaatgctgtccttgaaggtgcatgtgaaagagttattgttggtgacctt
tattgcgacatccagttgggtctatatgtgattcgtggggagaatgttgtcttaattgga
gagctggatttggagagggaggagcttccaccacatatgactcgtgtttcagaagcagag
attagaagggcgcagaaagcagaaagggaggcaacagatctaaaaggtacaatgaggaaa
agaatggagttccttgatttggactag
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