Populus euphratica (Euphrates poplar): 105116602
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Entry
105116602 CDS
T05872
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105116602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105116602
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105116602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Rrn6_HB
Motif
Other DBs
NCBI-GeneID:
105116602
NCBI-ProteinID:
XP_011012329
UniProt:
A0AAJ6XBF9
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MPRQKSILSFFQKPSLPSQSSYAGERTDGLQAPLFSAKQHNQNVSQPVIHGLVDSSIEIR
GTDTPPEKVPRQILPVNIKENEEVKVASLFSSIMHKFVKVDDREKPNGRNEVHSANVCST
SVTFTIPKELPQQGMDPLYSEKDNGFSSSGMVDQTSVLNIESVNDFPGPHTPGMRPLVPR
LKRILEDVPKFEDKNGCSLLNSSKRVKPLQDSASLIKNHEEISNSTSKFEWLDPAQIRDA
NGRRPNDPLYDKKTLYLPPDALKKMSASQKQYWTVKSQYMDVLLFFKVGKFYELYELDAE
IGHTELDWKMTLSGVGKCRQVGISESGIDDAVEKLVARGYKVGRVEQLETSDQAKSRGAN
SVIQRKLVQVVTPSTTTDHNMGPDAVHLLAIKEGNYGVDNGATAYGFAFVDCAALRVWVG
SINDDASHAALGALLMQISPKEVIYENRELSRGAQKELRKYSLIGSTALQLSPVLPGTDF
VDASEVKNLIQSKDYFKWSTNPWNHALDSIMHQDISLCALGGLIGHLSRLMFDDVLRNAD
ILPYQVYKGCLRMDGQTLVNLEIFSNSADGGSSGTLFNYLDNCVTSSGKRLLRNWICHPL
KHVEGINNRLDVIENLTARSEIMLVIAQYLRKLPDLERMLGRVKVSFQASGSLALPLISK
KLLKQRVKVFGSLVKGLRNGMDLLLLLLKEEQLISSLLKNFKLPELLGSNGLEKFLVQFE
AAVDSEFPNYQNRDVTDSEAGMLSVLIELFIEKAAQWGEVIHAINCIDVLRSFAVTASMS
CGAMCRPVILPDSKAISFCEGEGGPVLKIKGLWHPFALGENGLPVPNDVFLGEDSDSQHP
RTVLLTGPNMGGKSTLLRATCLAVILAQLGCFVPGEKCVLSLADIIFTRLGATDRIMTGE
STFLIECTETASVLQNATQDSLVLLDELGRGTSTYDGYAIAYAVFRHLVEKINCRLLFAT
HYHPLTKEFASHPHVSLQYMACAFKSKPASYSKSDRDLVFLYRLASGACPGSYGLQVATM
AGIPEHVVEAASHAGQLMKNSTGESFKSSERRSEFSTLHEEWLKTLVNVSRIRDCNFDDD
DVYDTLFCLWHELKSTYESCSSKSR
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccaaaaatcgatactctcgttcttccaaaaaccctcgctgcccagtcagagt
tcctacgccggagaaaggaccgatggtttgcaagctcctctgttctcggcgaagcaacat
aatcaaaacgtgtctcaacctgtgattcatggactggtggactcgtctattgaaattaga
ggaactgacacgccaccagaaaaggtgccccgtcagatattaccggtgaacatcaaggag
aacgaggaggtcaaagttgcttcgcttttctcgagcataatgcataagttcgttaaggtc
gatgacagagaaaaacctaatgggaggaacgaggttcattctgctaatgtttgctctaca
tctgttacatttactatcccaaaagaattgcctcagcaaggaatggatccactgtactct
gagaaagacaatggttttagttccagtggcatggtagatcaaacgagtgtcttgaacatt
gaaagtgtaaatgattttcctgggccacatacaccaggcatgcgaccactagttcctcgt
ctgaagagaattctagaggatgttcctaagtttgaggataagaatggttgttccttacta
aactccagcaaaagagtgaaaccactacaggactcagcttccttgataaaaaatcatgag
gaaatatctaattcaacaagcaagtttgaatggcttgaccctgcccaaatcagggatgct
aatgggagaaggcccaatgatcctctctatgacaaaaagacgctttacttaccacctgat
gcattgaagaaaatgtcagcttctcaaaagcaatactggactgtcaaatctcagtacatg
gatgttctacttttctttaaagtgggaaagttctatgaactctatgaactggatgctgaa
attggtcacacagagcttgattggaaaatgacattaagcggtgtggggaaatgtcggcag
gttggcatatctgaaagtgggattgatgatgctgttgaaaagctggtagctcgtggatat
aaagttggaagagtggagcaattggaaacatctgatcaagcaaaatctaggggtgcaaat
tctgtaatccaaagaaaattggtacaagttgtcaccccatcaaccacaactgaccataat
atggggcctgatgctgttcatcttcttgccataaaagagggaaactatggggtggataat
ggtgcaactgcttatgggtttgcttttgttgattgtgctgctctacgagtttgggttgga
tcaatcaatgatgatgcgtcacatgctgctttgggggcattattgatgcaaatttcacct
aaggaagtcatatatgaaaatagagagctttccagaggtgctcagaaagaacttaggaag
tactcattaattggttctacagcactgcaattgtcaccagtgctgcctggcactgatttt
gtggatgcttctgaagttaaaaatttgattcaatcgaaggattactttaaatggtctaca
aatccatggaaccatgcacttgacagtataatgcatcaggatatatctctatgtgctctt
ggcgggcttattggtcatctatccagattgatgtttgatgatgttttaaggaatgcagat
attctaccctaccaagtttataagggttgccttagaatggatgggcagactctagtaaat
ctggagatttttagtaacagtgctgatggtggttcatcaggtactttgtttaactatctt
gataactgcgtgacatcatctggcaagcggcttttgaggaattggatctgccatccactg
aaacatgttgaaggcattaataataggcttgatgttattgaaaatctaacggctcgttca
gaaattatgttagttattgctcaatatcttcgcaagcttccagatttagaaagaatgctt
ggacgagttaaggttagctttcaggcatcaggttctcttgcactgcccttgattagcaaa
aaattgctgaaacaacgagtgaaagtgttcgggtctctagtgaaagggcttcggaatgga
atggatttgttattgctattactgaaggaagagcaactaatttcatcattattaaaaaac
tttaaacttccagagcttcttggtagtaatgggcttgaaaaattccttgtgcaatttgaa
gcagctgtagatagtgaattcccaaactaccagaatcgtgatgtgacagattcagaggct
ggaatgctttctgtgctgattgagttatttatcgagaaagctgcacagtggggtgaagtc
attcatgcaatcaattgtattgatgtgcttagatctttcgcagtcacagcaagcatgtca
tgtggagctatgtgtagacctgttattttgcctgattcaaaagccatttctttctgtgag
ggggaaggggggcctgtacttaagattaaagggttatggcacccatttgcccttggagag
aatggattgcctgtcccaaatgatgtgttccttggtgaggattcagatagccaacatccc
cgcactgtgttgctgactggaccaaatatgggtggaaaatcaacacttctgcgtgccaca
tgtctagctgttatactagcacagcttggttgtttcgttcccggtgagaagtgtgttctc
tcacttgctgacataatttttacacggcttggtgccactgatcgaataatgacaggcgag
agtacattcttaattgagtgcacagaaacagcttcggtgcttcaaaatgccactcaagat
tcccttgtccttcttgatgaactgggtcgaggaacaagcacttatgatggatatgccatt
gcatatgctgtattccgccatcttgttgagaagataaactgtcgattgctttttgcaaca
cactatcacccgctcacaaaagaatttgcttctcatccacatgtttcattacaatacatg
gcttgtgcattcaagtcaaaacctgcaagctattctaaaagtgaccgggaccttgtcttc
ttgtaccggcttgcatctggagcatgcccagggagctacggattgcaagtggcaactatg
gctggcattccagagcatgttgttgaagctgcttcacatgctggtcaactgatgaaaaat
tcaactggagaaagtttcaagtcaagtgagcggaggtctgagttttcaactctccatgaa
gagtggttgaagaccctggtaaatgtctcacgaatcagagattgtaattttgatgatgat
gatgtttatgacacattgttttgcttgtggcatgagttgaagagcacgtatgaatcatgt
agctcaaagagtagatag
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integrated database retrieval system
