Populus euphratica (Euphrates poplar): 105116760
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Entry
105116760 CDS
T05872
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105116760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105116760
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105116760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
UBA_At5g58720
TPR_2
Motif
Other DBs
NCBI-GeneID:
105116760
NCBI-ProteinID:
XP_011012523
UniProt:
A0AAJ6XB99
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MGSEQDMSNWTDLLHSSTKLVEQAAPSAQFPPLQRNLDQLEALSKKLKAKTIRTEAPSQS
VAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNVRSFNDYMMKVLEEDWQKERRDFLQSLSRISSLPKTNLVDTSTGVTRSRQIASLSS
RPHVSSGSSGMENLPLANKSSVEKKASAYAEAVKNLNRAREHGSQFKPATAFKGAYESLG
AEVSGGKSVNMQKIWHLVQTLVGENTTMKQSISRKMSLVIGARCHLEWGHEKHIMDTIQN
HPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDASDAHRQPPVDTTWQQIYFCLRTGYY
EEARTVALSSRASLQFAPMLIEWINSGGMVPVDIAAAASEECEKMLRMGDRVGRAAYDKK
KLLLYAVVSGCRWQIDHLLRDLPTLFNTIEDFLWFKLSAVRDYPAGTSTLVLNESLVPYS
LEDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSVQMLPAILYLSREAADEGYDIDAVHIS
IALADHGVLTEGGGAGQKLGVMDAYAEVSSIIRQYGSAYLHHGNLSMALEYYAQAAATVG
GGETSWTGRSNIDQQRQRSLMLKQLLTELLLRDGGIYFLLGPRGAGEEGELARFLIDFQS
RQQFLLEAARKCQEAGLDEKSIEIQKRVGAFAMALDTINKSLSKAICALSRGRLDGESRT
AGLINSGNEILTTFKYYPDFSFQERDLVLEQETVLRQLEAILSVLKLARLGHFLDALREL
AKLPFLPLDPRVPDITVDVLQKLSPRVQDCVPDLLKVALTCLDNVTDSDGSLRAMKAKIT
QFIANNMSRNWPRDLYEKVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcgaacaggacatgagtaactggactgatctgcttcactcctctactaagctt
gtcgaacaagccgctccttctgctcagttccctcctcttcagagaaacttagatcaatta
gaagcattatcaaagaaactcaaggcgaaaactataagaactgaggctccttcgcaatct
gttgccgctacaaggcttcttgcgcgtgaagggataaatgcagagcagcttgctcgagat
cttaagtcttttgaattgaagacaacatttgaggatgtgtttcctgccgaggcaacaagt
gttgaagagtatctacaacaggtacatgaaatggcaatggtatcagccattcaggaagct
cagaaggataacgtaagaagttttaatgattacatgatgaaagttttggaggaggattgg
caaaaggaaaggcgtgactttcttcagagcttgagccgaatttcatcattacccaagact
aacttagttgatacaagcactggggttactcgttctcgtcaaatagcttctctgtcttcc
cgccctcatgtttcttctggttcatctggcatggaaaatttacctttagctaacaaatcc
tctgtggagaaaaaagcttcagcatatgctgaggctgtgaagaatctgaaccgtgcacga
gagcatggctcacagtttaaacctgcaacagctttcaagggtgcttatgaaagcttaggt
gctgaagtatcaggtggaaaatctgttaacatgcaaaagatatggcatcttgttcagaca
ttggtgggtgaaaatacaaccatgaaacagagtatttcaaggaaaatgtcgttagtgatt
ggtgcaaggtgccatcttgaatggggccatgaaaaacacatcatggatacaatacaaaat
catcctgctcaggctgctcttggtggagctgttgggaatttacaaagagttcgtgcattt
ctccggattcgattgcgggattatggagttctggattttgatgctagtgatgcgcatagg
cagcctcctgttgataccacttggcagcagatctatttttgcttgagaactgggtactat
gaggaagcgagaactgttgccctgtcttcccgtgcttcactccagtttgctccgatgctc
attgagtggattaactctggaggtatggtgcctgtggacattgcagctgctgcttcagaa
gaatgtgagaaaatgttaagaatgggtgatcgagtgggtcgagctgcatatgacaagaaa
aagttgttgctctatgctgtagtatctggttgccgctggcagattgaccacctgctgaga
gatcttccaacccttttcaatactatagaggattttctgtggttcaaattatcagctgta
cgagattaccctgctgggacctcgactctggtcctgaatgaaagcttggtaccatacagt
ttggaggatttgcaggcatacttgaataaatttgagccatcatattacacaaaaaatggg
aaagaccctctcgtgtacccttatgtattacttttaagtgtccagatgctaccagctatc
ttatatctgtctagggaagctgcagatgaaggatatgatattgatgcagtccatatatca
attgcactagcagaccatggggttcttactgaaggtggtggagctgggcaaaaactcggg
gtaatggatgcttatgcagaggtctctagcataattaggcagtatggatctgcatattta
catcatggaaatctctcaatggcactagaatattatgcccaagctgcagccacagtaggt
ggtggagaaacatcatggactgggagaagtaatattgatcagcagaggcagagaagcttg
atgttgaagcagctcctcactgagcttctgctaagggatggtggtatttattttcttctg
ggtccaagaggtgctggagaagaaggtgaattggcacgatttttgatcgatttccaatca
agacaacaatttctacttgaagctgctcgcaagtgtcaagaggctggactagatgaaaag
tctatagaaattcagaagagagttggggcatttgccatggctttagatacaatcaacaag
tccctttccaaagcaatttgtgcgctatcacgtggtagattggacggtgagagccgaact
gctggtctcattaattctggcaatgagattctcacgacctttaagtattatcctgatttc
agttttcaagaaagagaccttgtcctagagcaagaaaccgtgttgagacagcttgaggcg
atattatctgttctcaagttggcaagactgggtcattttcttgatgctttaagggagctt
gccaaacttccttttcttccattggatccacgagtgccagatatcactgttgatgttctt
cagaagttatcccctcgcgttcaggattgtgtgccagaccttttgaaggttgctttaaca
tgtttggataatgtgacagattctgatggatcacttcgtgccatgaaagcaaagattaca
cagttcattgcaaacaatatgagtcggaactggcctcgggatttgtatgagaaggttgct
cgaagtttgtga
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