Populus euphratica (Euphrates poplar): 105117688
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Entry
105117688 CDS
T05872
Name
(RefSeq) transcription elongation factor SPT4 homolog 2 isoform X1
KO
K15171
transcription elongation factor SPT4
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105117688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105117688
03019 Messenger RNA biogenesis [BR:
peu03019
]
105117688
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105117688
RNA polymerase I system
105117688
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105117688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
105117688
NCBI-ProteinID:
XP_011013733
UniProt:
A0AAJ6TLX7
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MGSAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFT
GIISVMDPSRSWAARWLRIDLYLVVIHLLFQRHFQRTYRIYVKMSVCPTFHQNVYKK
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcagcagcccaaatcccgacgagctttggacatgagctcagagcttgtctt
cgttgccgccttgtcaaaacttacgaccagttccgagagtcgggatgcgagaattgtccc
ttttttaagatggacgaagatcatgagcgtgtcgttgattgcacaactcctaactttacc
gggataatttctgttatggatccgagtagaagctgggctgctcgctggttgagaattgat
ttgtacctggttgttatacacttgctgtttcagaggcacttccagaggacttacagaatt
tatgtgaagatgagcgtgtgccctacattccaccaaaacgtgtataaaaaatga
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integrated database retrieval system
