Populus euphratica (Euphrates poplar): 105118115
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Entry
105118115 CDS
T05872
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105118115
Spliceosome [BR:
peu03041
]
Common components
Common spliceosomal components
General mRNP proteins
105118115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
105118115
NCBI-ProteinID:
XP_011014282
UniProt:
A0AAJ6TNV9
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MEFDEIEYLEKTVDEAEDRDDTRKKNSSSSKKRNGTERSYRKRDVGDEDIDNDEDRNANK
LLAEDENGRDRHHRRDRDLDRDRSSRQKDRERERREKEKERERRERVRERRDKDKEKEIE
RREKERERERRERGGEEGRERRERSRSRSRRYESDNRERGREREIDTRESRRFKEKKEVV
EPEADPERDQRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFY
DAMSVPMAITLSGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVAGPFGAVDRKLYVGN
LHFNMTEMQLRQLFEPFGIVELVQLPLDLETGQCKGFGFVQFTQLEDAKAAQNALNGKLE
IAGRTIKVSSVTEHGGQQDSGVKSADFDDDDGGGLALNAQSRALLMQKLDRTGTATSIAG
SLGVPLLNGSAPNQQAISLPVNGQTNIGAAAFPALVLPSPAYESIGKPSECLLLKNMFDP
ATETEPDFDLDIKEDVEEECSRYGQVKHIWVDKNSAGHVYLHFDSMEAAARAQRAMHMRW
FAQRSILAVFMPTHEYEARFQNGA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgacgagattgagtatctggagaaaacagtagacgaagcggaagatcgagac
gatacgaggaagaagaacagcagtagtagcaaaaagagaaacggaaccgagagaagttac
aggaagcgagacgtcggtgatgaagatatcgacaacgacgaggaccgaaatgcaaacaaa
ttgctagctgaggacgagaatggtcgcgatcgccaccaccgtagagaccgagatttagat
agagatagaagtagcagacagaaagatagagagagagagaggagagagaaagagaaggag
agagagaggagagagagggtgagagagaggagagataaagataaggagaaggagatagag
aggagagagaaggagagggagagggaaaggagagagagggggggagaggaggggagagag
aggagagagcgcagcaggagcaggtcgaggaggtatgaaagtgataatcgtgagaggggg
agagagagagagattgacacgagagaaagcaggagatttaaagaaaagaaagaagtggtg
gagcctgaagctgatccagaaagggaccaaagaactgtttttgtgtaccagatgcctttg
aaggcgacagagagagatgtgtatgaattcttctcgaaagcaggcaaggtcagggatgtt
cgattgataatggacagaaattcaaggcggtcaaaaggagttgggtatgttgaattctat
gatgcaatgtctgtgccaatggcaataactctttcaggtcaactgcttcttggacaacct
gtaatggttaagccttctgaggctgaaaagaacctcgttcagcctagtgcttcaggcggt
ggcacaggtggtgttgctggaccatttggagcagttgacagaaaactatatgttgggaat
ttgcattttaacatgacagaaatgcagcttagacagctttttgaaccatttggtattgtg
gagcttgtgcaactgcctcttgaccttgagacaggacaatgcaaaggtttcggatttgtt
caatttactcaacttgaagatgctaaggctgcacaaaatgctttgaatggaaaactggag
attgcgggtcgaactattaaggtttcatctgttacagaacatggcggacagcaagacagt
ggagtgaaatctgctgactttgacgatgatgatgggggtggattggctttgaatgctcaa
tcaagagcattgcttatgcagaagctggatcggactggcactgccacaagtattgcaggc
tctcttggagtacctttgctaaatggatcagccccaaatcaacaagccattagcttgcct
gtcaatgggcaaactaatattggagcagcagcatttccggcactagttttaccttcccct
gcttatgaatctattgggaaacccagcgagtgtctattgctgaagaatatgtttgatcca
gccactgagacggaaccagattttgatttggatattaaagaggatgtagaagaagaatgt
tcaagatacggtcaggtgaaacatatttgggtggacaagaatagtgctgggcatgtgtat
ctacattttgacagcatggaagcagcagcaagagctcagcgtgcaatgcatatgagatgg
tttgcacaaaggtcaattttagcagttttcatgccaacccatgaatatgaagcaagattc
caaaatggagcttga
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