Populus euphratica (Euphrates poplar): 105119512
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Entry
105119512 CDS
T05872
Name
(RefSeq) zinc finger CCCH domain-containing protein 16-like isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105119512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105119512
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105119512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH_DUS3L
zf-CCCH_2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
105119512
NCBI-ProteinID:
XP_011015956
UniProt:
A0AAJ6TR65
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MYKKKEPCRNFQRGSCQYGDRCKFLHVTPQQPPKSSNNPFGFGNQQTPNNNNNSFGFGNR
QQQQRPNGPFGPASNNSANNRPQQFKPFENKWSRGASAPSSRQRPDNQPANHNCADPDSC
KRLIAEDFEHERPLWKLTCYGHLKDGPCDIIGDVSYEELRAAAYDDYKCGLSLQSIVEKE
RNLLNSKLIEFNNLLHNPNSLKPAPAGQSPFFGATANATPATAQNTAPPSVSSFGQLGTS
LNMRSATPSNNAFGQPSQPLTAFGVSPPAPSNIVFGQSNLPSNSSQTVSAFGTNNFLSAN
ASNSSQTSSAFGTTNFPSINAGLLGSQLPNQALGNSFSRNIAGFGNSGVNSIQNISSSPL
SMQNSSIHPLSISNGLNSAFNAAGQATTNVQPVTMVQRETFSGDASIWLKEKWIPGEIPE
EAPPEEYVF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaagaaggaaccttgtaggaattttcagcgtggcagctgtcagtatggtgat
agatgcaaatttcttcatgtcactcctcagcaaccccccaaatccagcaacaatcccttt
ggatttggcaatcagcaaacacccaataacaacaataactcttttggatttggcaatcga
cagcaacagcaaagacccaacggtccttttgggcctgcctccaataattctgctaataac
agacctcaacagttcaagccttttgagaataaatggtcccgtggtgcctctgccccttca
tcgcgtcaaagacctgacaatcagcctgccaatcataattgcgcggatcctgattcgtgt
aaacgtctcattgctgaagattttgagcatgagagaccgctttggaagcttacatgctat
ggtcatttgaaagatggcccatgtgacattattggtgatgttagttacgaagaattgcga
gctgcagcatatgatgattataagtgtgggttgagcttgcaatcaattgttgaaaaggag
agaaatttactcaattcgaagttgattgagttcaataaccttctccataatcccaattcc
ttaaagcctgctcctgctggtcagagtccgttctttggagccactgccaatgcaactcca
gctactgctcaaaatactgcgcctccatcagtttccagttttggtcaactggggacttct
cttaatatgaggtctgctacaccatcaaataatgcctttgggcaaccaagtcagcctttg
actgcatttggagtaagcccccctgcaccatcaaacattgtctttgggcaatcaaatctt
ccttcaaattctagccagactgtgagtgcatttgggacaaataattttctctctgcaaat
gcctcaaattctagccagacttcaagtgcatttggaacaaccaattttccatccataaat
gccggcctgcttggcagccaactccctaatcaggcacttggaaattccttctcccgcaat
atagcaggctttggcaacagtggtgtaaacagcattcaaaatatttcttcttctccattg
tcaatgcaaaactcatcaatccaccctcttagcatttccaacgggctcaattcagctttt
aatgcagcagggcaagctactacaaatgttcagccagtaactatggtgcaaagggagact
ttttctggggatgcaagcatctggttgaaggaaaaatggattcctggagagattccagaa
gaagcacctcctgaagaatatgtcttctag
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