Populus euphratica (Euphrates poplar): 105120480
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Entry
105120480 CDS
T05872
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105120480
Enzymes [BR:
peu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
105120480
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
105120480
NCBI-ProteinID:
XP_011016987
UniProt:
A0AAJ6TSU5
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All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MSTPRVQLLIEDQHVVMDNGILQVTLSNPGGLVTGIQYNGIDNLLEVLDVETNRGYWDLV
WSQAGSTGTTGTFDVFEGTTFRVIVENEEQVEVSFTRTWDPSLEGKFVSLNLDNRFIMLR
NSSGFYSYAIFEHLADWPPFNLPQTRIVFQLRKDKFHYMVVADNRQRFMPLPDDRLPERG
EPLDFPEAVLLVDPVEPEFKGEVDDKYQYSCENKDLHVHGWICFDPPTGFWQITPSSEFR
SGGPLKQNLTSHVGPYTLAMFLSAHYAGEDLVLKLNPGEPWKKVFGPVFMYLNSVVDKDN
ALSLWDDAKEQYLKEVHCWPYSFPASEDFPCSDQRGKISGRLQVLDRYISHECIAANDAY
VGLAPPGDVGSWQRECKGYQFWTKTDGDGSFCIGDIRTGDYNLYAWIPGFIGDYRNDTVI
TVTAGCEIDVGDLVYEPPRDGPTVWEIGIPDRSAAEFYIPDPNPKYINKLFINHPDRFRQ
YGLWERYADLYPDGDLVYRVGLSDYKKDWFFAQVNRKKDDGTLEGTTWQIKFKLDDVDQS
GAFKLRLALATANVAELLVRINDPKIDPPHFSTGEIGHDNTIARHGVHGLYRLYNVDVPG
TTLVEGENTVFLTQTPRTSPLQGIMYDYIRLEGPPPPDSKETL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcctagggtgcagttgctcattgaagatcaacatgtggttatggataacggc
attcttcaagtcacactatcaaacccaggaggactcgttactggcattcagtataatggt
atagacaatttgcttgaagttcttgacgtggaaactaacagaggatattgggaccttgtt
tggagtcaagcaggaagcacaggaacaacaggaacttttgacgtgtttgaaggaacaact
tttagggttatagtggaaaatgaagagcaagtagaagtctcattcacaagaacatgggat
ccctcccttgaaggcaaattcgtttccttgaacttggacaacaggttcataatgctcagg
aattcttcaggattttattcctatgccatttttgagcatttagcagactggcctcctttc
aacctcccgcaaaccagaattgtcttccagctcagaaaagacaagtttcactacatggtc
gtagcagacaacaggcaaagattcatgccacttcctgatgacaggctacctgaaagaggt
gagcccctagactttcccgaagcagtcttgcttgttgacccagtggagccagagttcaaa
ggagaggtagatgacaagtatcaatactcatgtgagaacaaagatctccatgttcatggg
tggatttgctttgatccacccacggggttctggcaaatcacacctagcagcgagttccga
tctggtggaccactcaagcagaaccttacctcccatgttggaccctatactctcgcaatg
tttctcagtgctcattatgctggagaggaccttgtgctaaaactcaaccctggtgaaccg
tggaagaaggtttttggacctgtttttatgtatctcaactctgttgtggataaagataat
gcactttccctttgggatgatgctaaggaacagtatttgaaggaagtccactgttggccg
tacagcttcccagcttctgaagattttccatgctccgatcaacgtggtaaaatcagtggc
aggttacaagtcctagataggtatataagccatgaatgcatagctgctaatgatgcttat
gtggggctagcaccgccaggagatgttggatcgtggcaaagagaatgcaagggataccaa
ttctggaccaaaacagatggggacggctctttctgtattggcgatatacgcactggcgac
tacaatctttatgcatggattcctggtttcatcggcgattaccgaaatgatactgttatt
acagtaactgcaggttgtgaaatcgatgttggtgatcttgtatatgaacctccaagagat
ggtccaacagtgtgggaaataggcataccagatcgatctgctgcagagttttacattcct
gatcctaacccaaagtatattaacaaacttttcatcaaccatcctgacaggtttaggcag
tatgggctgtgggaaaggtatgctgatttatatcctgatggggatctggtatacagagtt
ggtctcagtgactacaagaaagattggtttttcgctcaagtaaacaggaagaaagatgac
ggtacattagaaggaacgacatggcaaatcaagttcaagctggacgatgtagatcaaagt
ggtgcgttcaagttacgattggcactggcaacagccaacgttgcagaactgctagttcgg
ataaacgatccaaaaatagatcctccccatttttcaaccggagaaattgggcatgacaac
acaatagcaaggcatggagtccatggcctctaccgcctttacaatgtagatgtgccaggc
actacgcttgtggaaggagaaaataccgtgtttctgacacaaacacctagaaccagccct
ttgcagggcatcatgtatgattatattcgcttagaaggccctccaccacctgattccaag
gagacactttga
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