Populus euphratica (Euphrates poplar): 105120836
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Entry
105120836 CDS
T05872
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105120836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105120836
Spliceosome [BR:
peu03041
]
Complex A
U1 snRNP components
U1 related factors
105120836
Complex B
105120836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
SMODS
Motif
Other DBs
NCBI-GeneID:
105120836
NCBI-ProteinID:
XP_011017521
UniProt:
A0AAJ6TV51
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MFLPCLSISWLGISVDYLGFELFLWLLYLFATDSCLQCVVINYILLISATNPQFSGRGQF
XPMVPAQQGQPFIPVASQQFRPVGQGMPSSHVGMPAAQPLQSLQPIQQLPPWTNQPGPGA
PSAQALSMPYVQPNRPLTSSQTQQTAPPLSNHLXGVGTSGIPISLPYAFAPSSFGLPQNS
ASALPQFPTMSQMHATIVSVGGQPWLPHGSYCASLVPPVQPAVAQISISSSSDSAIAVSS
NSQQSLNDWQEHTASDARRYSCHYFLSPILLFKTLASINSYLGVKGIDLIHEVDVEVPVC
SETSLISCLFCCIVHGVVYYCYSCYFSKAISLFENDERYKAVERARDREDLVDSYIVELE
RKEKEKAAEDHRRNVAEYRKFLESCDFIKANSQWRKIQDHLEDDERCLCLEKLDRLLIFQ
DYIHNLEKEEEEQKKIQREQLRRXKNRDKFRKLLEEHVASGSLTAKTHWLDYCLKVKYLP
QYHAVATNTSGSKPKDLFEDVSEELQKRYQDDKTRIKDAMKLGKITMVSTWTFEDFKATI
SDGAGSPPISDINFKLLCEEPVERAKEEGREAEKXQHLTDDFTKLLYTFKEVIASSNWED
CKQLFEESQEYRSIGEESLIKEIFEEYVTRLQERAKEKEHKHEEEKARKEKDXEEKDKRK
EKERKEKEREKEKERDREKGKERTKEDETDSENVDASDGYGHKEEKKRENYKDRKHWKRH
QSATDDANSDKDGE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgccatgtctctcaatttcctggctaggaatttcggtcgattatctaggtttt
gagctttttttgtggctgctgtatctttttgcgacagattcttgtcttcaatgcgtggtt
attaattatatccttttgatttctgccactaatccccagttttctggccgtggacagttt
tgaccaatggttccagcacagcaaggacagccattcattccggtggcttcccaacagttt
cggccagttggacaaggtatgccttcttcacatgttgggatgccagctgcccagcctctg
caatctttacaaccaatccagcagctaccaccatggacaaatcagcctggccctggggca
ccttcagcacaggctttgtcaatgccttatgttcaaccaaacaggcctctgacatcatca
cagacccagcaaactgcccctccattaagtaatcatttgnctggggttggcacctcaggg
attcctatttccttgccatatgcttttgcaccatcctcttttggcctgccacaaaatagt
gccagtgcattgccccagttcccaacaatgtcacaaatgcatgcaactattgtatccgtg
gggggacagccttggttgccacatggaagttattgtgcttcacttgttcccccagtacag
ccagctgttgcccagatttctatatcatcttcctcagattcagcaattgctgtttctagc
aatagtcaacagtctttgaatgattggcaagaacatacagcttctgatgcgaggagatat
agttgtcattacttcttatctcccattctgttattcaaaacattggcttctataaattca
tacttgggagtcaaaggaattgacttgatccatgaagtggatgttgaagttccagtctgc
tcagagacaagtttgatatcttgtttattttgctgtatagtgcatggtgtagtttactat
tgttactcttgttatttcagcaaagctataagcctgtttgaaaatgatgaacggtacaaa
gctgttgagagagccagagaccgagaggatcttgttgacagctacattgtggaacttgaa
aggaaggaaaaagagaaagctgctgaggaccataggaggaacgtagcagaatatagaaaa
tttctggagtcctgtgatttcattaaggccaacagccagtggcggaaaattcaagatcac
ttagaagatgatgaaaggtgcttgtgtcttgaaaaacttgatcgtttgctcattttccag
gactatattcacaatttggagaaagaggaagaggaacaaaagaagatacaaagggaacaa
ttgagacgtnngaaaaatcgtgacaagtttcgaaaattgttggaagaacatgttgcctct
ggctcccttacagctaaaactcactggcttgactattgtttgaaggttaagtatttgcct
caatatcatgctgttgcaacaaatacttctggctcaaaaccaaaagatctgtttgaggat
gtttctgaagaattacagaaacggtatcaagatgataaaactcgtataaaggatgcaatg
aagctggggaagatcaccatggtgtctacttggacatttgaagacttcaaggctactatt
tctgatggtgctggttccccaccaatatcagatattaactttaagcttttatgtgaggag
ccagttgaaagagccaaggaggaggggagagaagctgaaaaatagcaacatcttactgat
gatttcactaaactactgtatacttttaaggaagtaattgcatcttctaactgggaggat
tgcaaacaactttttgaggagagccaggagtacagatcaattggggaagagagtttgatt
aaggagatttttgaagaatatgtcacacgcttacaagaaagggccaaagagaaggaacac
aagcacgaggaggaaaaggccaggaaagaaaaagatnnagaggaaaaagacaagagaaaa
gagaaagagagaaaggagaaggagagagagaaagagaaagaacgtgacagggaaaaggga
aaggaacgaacaaaagaggatgaaacagatagtgaaaatgttgatgcaagtgatggttat
ggccacaaggaggagaaaaagagggaaaattacaaagataggaaacactggaaacggcat
caaagtgccactgatgatgcaaattctgacaaggatggggaatag
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