Populus euphratica (Euphrates poplar): 105121272
Help
Entry
105121272 CDS
T05872
Name
(RefSeq) small nuclear ribonucleoprotein E-like isoform X1
KO
K11097
small nuclear ribonucleoprotein E
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105121272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105121272
03041 Spliceosome [BR:
peu03041
]
105121272
03032 DNA replication proteins [BR:
peu03032
]
105121272
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105121272
Spliceosome [BR:
peu03041
]
Complex A
U1 snRNP components
Sm proteins
105121272
U2 snRNP components
105121272
Complex B
U1 snRNP components
105121272
U4/U6.U5 tri-snRNP components
105121272
Complex C
U2 snRNP components
105121272
DNA replication proteins [BR:
peu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105121272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
105121272
NCBI-ProteinID:
XP_011018153
UniProt:
A0AAJ6TV28
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV
NIKKKSRKSLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccaaagtgcagcgtattatgacccaacccattaacttgattttcaggttt
cttcaaagtaaagctcgcattcagatttggctttttgagcagaaggacttgaggattgaa
ggccgaatcattgggtttgatgagtacatgaatttggttttggaagatgctgaagaagtc
aatatcaagaaaaagagcagaaagtctttaggaaggattcttcttaaaggagacaatatt
actcttatgatgaacacgggaaagtaa
DBGET
integrated database retrieval system
