Populus euphratica (Euphrates poplar): 105121696
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Entry
105121696 CDS
T05872
Name
(RefSeq) cell division cycle protein 48 homolog isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105121696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105121696
03009 Ribosome biogenesis [BR:
peu03009
]
105121696
04131 Membrane trafficking [BR:
peu04131
]
105121696
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peu04147
]
105121696
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105121696
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
105121696
Membrane trafficking [BR:
peu04131
]
SNARE
SNARE associated proteins
Others
105121696
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105121696
Exosome [BR:
peu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105121696
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_14
AAA_22
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
AAA_17
Mg_chelatase
ATPase_2
nSTAND_NTPase5
AAA_18
Parvo_NS1
ABC_tran
NB-ARC
NACHT
AAA_7
Vps4_C
Viral_helicase1
TsaE
IstB_IS21
AAA_lid_PRS2_C
DUF815
Zeta_toxin
AAA_24
CDC48_N
Zot
Motif
Other DBs
NCBI-GeneID:
105121696
NCBI-ProteinID:
XP_011018732
UniProt:
A0AAJ6XH29
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLEAY
RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYD
DVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA
FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRI
VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIH
TKNMRLAEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNS
MAVTDEHFKTALGTSNPSALRETVVEVPNVSWEDIGGLETVKRELQETVQYPVEHPEKFE
KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD
KARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATN
RPDIIDPALLRPGRLDQLIYIPLPDEESRFQIYKSCLRKSPVSKDVDLRALAKYTQGFSG
ADITEICQRACKYAIRENIEKDIERERRRSENPEAMEEDVEDEVAEIKASHFEESMKYAR
RSVSDADIRKYQAFAQTLQQSRGFGSEFRFAEASAGATGSDPFAASAGGADEDDLYS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggttgtgaggtcgaacctgagggttaggcttggagatgtggtgtctgtacac
cagtgtcctgatgtcaagtatggaaaacgtgtgcacatcctgcccatagatgacacaatt
gaaggggtcactggcaatctctttgatgcctacttgaagccttatttcctggaggcatat
cgcccagtgaggaagggtgatctcttccttgtaagagggggaatgagaagtgtggagttc
aaagttattgaaactgatccaccggagtactgtgtggtcgctccagacacagagatcttc
tgtgagggagagcctgtgagaagggaggatgagaatagattagatgaagttggttatgat
gatgttggtggtgttagaaaacaaatggctcagattcgggagttagtggagcttccattg
agacacccacaactattcaaatcaattggtgtgaaaccaccgaaaggtattctgctgtat
ggacctcctggttctgggaagactcttattgcccgagcagtggctaatgaaactggtgct
ttcttcttctgtattaatggacctgaaatcatgtcaaaattggctggagagagcgagagc
aatctcagaaaagcgtttgaggaagcggagaagaatgcaccttcgattatatttatcgac
gaaattgattcgattgctccaaagcgagagaagacaaacggagaggttgagaggaggatt
gtatcccagctcttgacactcatggatggactaaaatcccgggcacatgttattgtcatg
ggggctacaaatcgacccaatagcattgaccctgctctgaggaggtttggcagatttgat
agggaaatcgatatcggtgttccagatgaagttgggcgccttgaggttcttcgtattcat
accaagaacatgaggcttgctgaagatgttgatttggaaagaattgccaaggatacccat
ggttatgttggtgctgatttagcagcgctttgcactgaggctgcacttcaatgcatcaga
gaaaagatggatgtgattgatttggaagatgagacaatagatgctgagatactcaactcc
atggcagtgactgatgaacacttcaagactgctcttggaacaagcaacccatctgctttg
cgtgaaacagttgtcgaagttcctaatgttagttgggaagatattggtggtcttgagact
gttaagagagagctgcaggagaccgttcaatatccagtggagcacccagagaaatttgag
aagtttggaatgtcaccatcaaagggagttctgttctacggtccccctggatgtggaaaa
actcttctggctaaagctattgccaatgaatgccaggcaaacttcatcagcgtcaagggt
cctgaattgcttacaatgtggtttggtgagagtgaggccaatgtacgagaaatttttgac
aaagctcgccaatctgctccttgtgtcttgttctttgatgaacttgactcaattgcaact
cagagaggaagcagtgtgggagatgcggggggtgctgctgatagagttttgaaccagctt
ctgacagagatggatggcatgtctgcaaagaaaactgttttcataattggggcaactaac
agacctgacatcatagaccctgccctattgcgtccagggcgtcttgatcagttgatctat
atccctcttcctgacgaggagtctcgctttcagatttacaaatcttgcttgaggaaatca
ccagtctctaaagatgttgacctcagagcactcgccaagtatacacagggtttcagtggt
gctgatattacagaaatatgccagcgtgcctgcaaatatgccataagagagaacattgag
aaagatatcgagagggagaggaggcgaagcgagaaccctgaggctatggaggaagatgtt
gaggatgaggtggcagagatcaaggcatcacactttgaggaatccatgaaatatgcccgt
cggagtgttagtgatgctgacatccgcaagtatcaggcgtttgctcaaacactgcaacag
tcaagagggtttggatctgaattcaggtttgctgaagctagcgccggggcaactggatcc
gatccgtttgcagcttctgctggcggggctgatgaagatgacctttatagctaa
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