Populus euphratica (Euphrates poplar): 105121761
Help
Entry
105121761 CDS
T05872
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
peu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105121761
03015 mRNA surveillance pathway
105121761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105121761
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105121761
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105121761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
IFT52_central
DUF5886
Motif
Other DBs
NCBI-GeneID:
105121761
NCBI-ProteinID:
XP_011018845
UniProt:
A0AAJ6TY27
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MAEVTETTAASSSEGKNPAVPETKRLWSDEVDDEEVQPTATEEKAVSELNVDALAIDENT
KVNKFLDEPADSRIQAVTTGDTPYTSASTFEDLNLSPELLKGLYVEMKFQKPSKIQAISL
PMIMTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPKQQRPQALCICPTRELSIQNMEVLR
KMGKYTGISSECAVPIESRTNNRSRPQLPISAQVVIGTPGTIKRLMSQKKLGVTDMKVLV
FDEADHMLAKDGFQDDSLRIMKDIQRFNSHCQVLLFSATFDETVKNFVSKVVKDYNQLFV
KKEDLSLESLKQYKVTLPDELAKIGVVKDRILELGENIGQIIIFVNTKRSASMLHTSLVD
LGYEVTTIHGALNLEDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKYE
DQSEPHYEVYLHRIGRAGRFGRKGAVFNFLMTDHDLMIMRKIESYFNSPVAEIPSWGSEE
GFKVALKEAGLL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagttactgaaaccaccgccgcttccagctccgagggcaaaaacccggcggtg
ccggagactaaaagattatggagcgacgaagtagatgacgaagaggttcagccgaccgca
acagaggaaaaagctgtctcggagctaaacgttgacgcattagctatcgacgagaacacg
aaagtcaacaagttccttgacgaacctgctgactctagaatacaagccgttacaacaggg
gatacaccatacacatcggcatccacatttgaagatttgaacctgtccccggagctcctc
aagggtttgtatgtggagatgaaattccagaagcctagtaagattcaagctattagtctt
ccaatgatcatgactcctccatacaaagatttgattgctcaggcacataatggttctggt
aagaccacttgttttgtgcttggcatgttgagtcgtgttgatccaaaacaacaaaggccc
caagcactctgcatttgccctacaagagagttatcaattcagaatatggaagttcttcgg
aagatgggaaagtatactggaataagttcagaatgtgcggtgcccatagaaagcagaact
aataatagatccagaccccaacttccaatatctgcacaagtggtgattgggactcctggt
acgataaagagattgatgtcacagaagaaactgggtgttactgatatgaaggttcttgtt
tttgatgaagctgatcacatgctggccaaggatggctttcaagacgattccttgaggata
atgaaggacattcaaagattcaattctcattgccaggttcttctgttctctgccactttt
gatgagaccgttaagaactttgtgtcaaaggttgtgaaagattacaaccaactttttgta
aagaaagaagatctgtcattggaatcattgaagcagtataaggtgacacttcctgatgaa
cttgccaagattggagtagtaaaagataggattcttgagttgggagagaacataggccag
atcattatatttgtcaatacaaagcgcagcgccagcatgctgcacacttcccttgtggat
ttaggctatgaagtcactaccattcatggcgcacttaatcttgaagaccgagacaaaata
gtcaaagaattcaaggatggattgactcaagttctcatatcaactgatgttctcgcccga
ggttttgaccaacaacaggttaatttggtaatcaattatgatcttccagtgaagtatgaa
gatcaatcagagcctcattatgaggtctacttgcacaggattggtagggctgggcgtttt
ggccgcaaaggggctgtgtttaatttcttaatgactgaccatgatttgatgatcatgagg
aagatagagagctacttcaatagtccagttgctgagataccatcatggggcagcgaagag
ggcttcaaggttgctctcaaggaagctggtttgctgtga
DBGET
integrated database retrieval system
