Populus euphratica (Euphrates poplar): 105122248
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Entry
105122248 CDS
T05872
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105122248
Transcription machinery [BR:
peu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
105122248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
105122248
NCBI-ProteinID:
XP_011019551
UniProt:
A0AAJ6TYV5
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MGVGFRPTPKWGSPMQSHSVTNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNKH
SFKSFACSSAAQNVENDCLQMERLKMNVDKTSHVSINNTMGNDKVSVEEEISTSHTRLRE
RMTSRFSFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSNALD
LSAVPTENTGESKTDGMLDDLTGKTVVRTGKKEERKFRRGRAASDNGKKTTSLSLPSKSV
QNNLQKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSLSCW
AEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGLLQ
GAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQKARKALSNSD
GRYPDDWEVAKFTGLSLAKIESAKKCLRVVASLDQKIGEGHYAKYSEFIPDMSIQNPEEA
VMRQHMREEIYDLLRGLESRERQVMVLRYGFKDNQPKSLAEIGRLFHVSKERVRKIEKKI
MIKLRDEGIRRNLSRYMIL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgggttttaggccaactcctaagtggggttctcctatgcagtctcactctgtc
accaattctacatccatgttctcatccttttctgctagaggcatggaggcttctgtcaac
caggcaaggttgtcttttttgtctgttgtttccgaagagggtgatattctcaacaaacat
tctttcaagtcttttgcttgttcatcggcagcacaaaacgtggaaaatgattgcttgcaa
atggaaagactgaagatgaatgtggacaagacgtctcatgttagcataaataacacgatg
ggtaatgataaagtgtctgttgaagaggaaatttctacctcacatacacgcttgagagag
cgaatgacatcgcgttttagctttctgctggacaatcttgatactttagagaagctggtt
gctgacttggatgcactgaagttggaaagggatattttgctgcaattaggaagacttgga
gctctagaatttttcaatgcctgtctgtcaaggacccttcaaacttccaatgctttggac
ttgtctgctgttcctactgagaatacgggagagagtaaaacagatggcatgttagatgat
ctcacaggtaaaactgttgttcgcactgggaaaaaggaagaaagaaaatttagaagagga
agagctgcctcagacaacggaaaaaaaactacttctttgtctctgccttcaaagagtgtc
caaaataatcttcaaaagcctacctttgtgaaaagaacatcaagctctagtagtagacga
tccttgatagcaagaaatgaggcaaaaatgacaaggggagtcaaggtggcttcagacttg
gagagaatcagaacaactttagaggaagaaaccggacaagtagtcagtttaagttgctgg
gctgaagcaactggacttgacaaaaaggtgctgcagcagcaattgcaatttggttggtac
tgtcgagatgagctcataaagaatactcactccttagttttatacattgcaagaaactac
aggggaatgggaatagccatggaagatttaattcaggctggaaatttgggtctcttacaa
ggtgcagaaaggtttgatcccacaagggggtacagattctcaacctatgtccagtattgg
ataaggaaatctatgttaaagattgttgagcggcatgctagagggatccaaattccttat
gcattaagccggtcaataaacaagatacaaaaagctcgaaaagccctcagcaacagcgat
ggcagatacccggatgactgggaggttgctaaattcacaggtctatctttggctaaaatt
gaatcggctaagaaatgtctcagagtcgtggcttcacttgatcagaaaataggagaaggt
cactatgctaaatattcggaatttatccctgatatgtcaattcagaatcctgaagaggct
gtcatgaggcagcacatgagagaagaaatctatgatctcttgagaggtttggaatcaaga
gagaggcaagtgatggtcctgagatacgggttcaaggacaatcaaccaaaatcactagca
gagatcgggaggctattccatgtgagcaaagagcgtgtgaggaagattgagaaaaaaatc
atgataaaactaagggatgaaggaatccgcagaaatctaagtcgttatatgattttgtag
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