KEGG   Populus euphratica (Euphrates poplar): 105122248
Entry
105122248         CDS       T05872                                 
Name
(RefSeq) RNA polymerase sigma factor sigC
  KO
K03093  RNA polymerase sigma-I factor
Organism
peu  Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:peu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peu03021]
    105122248
Transcription machinery [BR:peu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     105122248
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2
Other DBs
NCBI-GeneID: 105122248
NCBI-ProteinID: XP_011019551
UniProt: A0AAJ6TYV5
LinkDB
Position
Unknown
AA seq 559 aa
MGVGFRPTPKWGSPMQSHSVTNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNKH
SFKSFACSSAAQNVENDCLQMERLKMNVDKTSHVSINNTMGNDKVSVEEEISTSHTRLRE
RMTSRFSFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSNALD
LSAVPTENTGESKTDGMLDDLTGKTVVRTGKKEERKFRRGRAASDNGKKTTSLSLPSKSV
QNNLQKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSLSCW
AEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGLLQ
GAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQKARKALSNSD
GRYPDDWEVAKFTGLSLAKIESAKKCLRVVASLDQKIGEGHYAKYSEFIPDMSIQNPEEA
VMRQHMREEIYDLLRGLESRERQVMVLRYGFKDNQPKSLAEIGRLFHVSKERVRKIEKKI
MIKLRDEGIRRNLSRYMIL
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgggtgtgggttttaggccaactcctaagtggggttctcctatgcagtctcactctgtc
accaattctacatccatgttctcatccttttctgctagaggcatggaggcttctgtcaac
caggcaaggttgtcttttttgtctgttgtttccgaagagggtgatattctcaacaaacat
tctttcaagtcttttgcttgttcatcggcagcacaaaacgtggaaaatgattgcttgcaa
atggaaagactgaagatgaatgtggacaagacgtctcatgttagcataaataacacgatg
ggtaatgataaagtgtctgttgaagaggaaatttctacctcacatacacgcttgagagag
cgaatgacatcgcgttttagctttctgctggacaatcttgatactttagagaagctggtt
gctgacttggatgcactgaagttggaaagggatattttgctgcaattaggaagacttgga
gctctagaatttttcaatgcctgtctgtcaaggacccttcaaacttccaatgctttggac
ttgtctgctgttcctactgagaatacgggagagagtaaaacagatggcatgttagatgat
ctcacaggtaaaactgttgttcgcactgggaaaaaggaagaaagaaaatttagaagagga
agagctgcctcagacaacggaaaaaaaactacttctttgtctctgccttcaaagagtgtc
caaaataatcttcaaaagcctacctttgtgaaaagaacatcaagctctagtagtagacga
tccttgatagcaagaaatgaggcaaaaatgacaaggggagtcaaggtggcttcagacttg
gagagaatcagaacaactttagaggaagaaaccggacaagtagtcagtttaagttgctgg
gctgaagcaactggacttgacaaaaaggtgctgcagcagcaattgcaatttggttggtac
tgtcgagatgagctcataaagaatactcactccttagttttatacattgcaagaaactac
aggggaatgggaatagccatggaagatttaattcaggctggaaatttgggtctcttacaa
ggtgcagaaaggtttgatcccacaagggggtacagattctcaacctatgtccagtattgg
ataaggaaatctatgttaaagattgttgagcggcatgctagagggatccaaattccttat
gcattaagccggtcaataaacaagatacaaaaagctcgaaaagccctcagcaacagcgat
ggcagatacccggatgactgggaggttgctaaattcacaggtctatctttggctaaaatt
gaatcggctaagaaatgtctcagagtcgtggcttcacttgatcagaaaataggagaaggt
cactatgctaaatattcggaatttatccctgatatgtcaattcagaatcctgaagaggct
gtcatgaggcagcacatgagagaagaaatctatgatctcttgagaggtttggaatcaaga
gagaggcaagtgatggtcctgagatacgggttcaaggacaatcaaccaaaatcactagca
gagatcgggaggctattccatgtgagcaaagagcgtgtgaggaagattgagaaaaaaatc
atgataaaactaagggatgaaggaatccgcagaaatctaagtcgttatatgattttgtag

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