Populus euphratica (Euphrates poplar): 105122517
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Entry
105122517 CDS
T05872
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105122517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peu03009
]
105122517
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105122517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_VPS8
NBCH_WD40
WD40_RFWD3
Beta-prop_LRRK2
WD40_like
VID27
Beta-prop_SCAP
Cytochrom_D1
RMC1_N
MIOS_WD40
VPS8_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
105122517
NCBI-ProteinID:
XP_011019954
UniProt:
A0AAJ6TZD6
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MGIFEPFRAIGYITTGVPFSVQRLGTETFVTVSLGKAFQVYNCAKLTLVIVSPQLPHKIR
ALACYRDFTFVAYATHIAVFKRAHQVTLWSRHSAKVNSLMVFGDYVISVDVDGNLFIWGF
KGLDESNVPVGHILFEDKFTPTCMMHPDTYLNKVLIGSQEGGLQLWNVSTKKMLYEFKGW
GSSVTSCVSSPALDVVAVGCLDGKIHVHNIRYDEEVVTFVHSMRGAVTSLSFSTDGQPLL
ASGGSSGVISIWNLEKRKLQSVVRDAHDSSIISLHFLANEPVLMSSSADNSIKIWIFDTT
DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVSKR
AKKLRVKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVIGEHILRPC
LENLTPVKACTISACGNFAILGTAGGWIERFNLQSGISRGSYMDVSERGSCAHESEVVGV
ACDSTNTQMISAGYHGDVKVWDFKGRALKFRWEVGCPLVKIVYHRLNGLLATVADDFVIR
LFDAMALRMVRKFEGHTDRITDLCFSEDGKWLLSSSMDGTLRIWDVILARQIDAVHVDVS
ITALSLSPNMDVLATTHVDQNGVYLWANQSMFSGASNIDSYASGKEVVNVKLLSLSSVEG
SNVENEDTDKPIVNQSVSNEASTFPAFSQQIPDLVTLSLLPKSQWQSLINLDIIKVRNKP
IEPPKKPEKAPFFLPSVPSLSGEILFKPSEPVDGEDTKPDKAESDERKVGIPVTQFLELL
QSSSEMKNFSAFTEYIKGLSPSNLDMELRMFQIIDEDEDEEELVKRPEFISIELLLDYFI
HEISCRNNFEFVQAVTRLFLKIHGETIRCNSKLQDKARKLLDTQSAIWQRVDKLFQSTRC
MVTFLSNSQF
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcttcgagccattcagagccatcggatacataacaaccggcgtgccgttttcc
gtccaaagattgggcactgaaacctttgtcacagtcagtttaggcaaagcttttcaagtt
tacaattgtgcaaagctcactttagtcatcgtcagccctcaactccctcacaaaatacgc
gctttagcttgctatcgtgacttcaccttcgtcgcctacgcaacccacatcgccgtcttc
aaacgcgcccatcaagtgacgttgtggagtaggcatagtgcgaaggtgaattcgttgatg
gtatttggggattatgtgataagtgttgatgttgatggtaatttgtttatttggggtttt
aaagggcttgatgagagtaatgtgccggttgggcatattctgttcgaggataaatttaca
ccaacttgtatgatgcatccggatacttatttgaataaggttttgattgggagtcaggag
gggggtttacagctttggaatgttagtacaaagaaaatgttgtatgagtttaaagggtgg
ggttcgtctgtgactagttgtgtgtcctcacctgcgttggatgttgttgcggttggctgt
ttagatgggaagattcatgtgcataatattcgttatgatgaggaggtggttacgtttgtg
cattctatgcgtggtgctgtgacctcattgtctttcagtacagatggacaaccactttta
gcgtcaggaggttcatctggtgttataagcatatggaatctggagaaaagaaaactacaa
tcagttgttagagatgctcatgatagttcgataatttcattgcactttttagctaatgaa
cctgtgctgatgagttcatcagcagacaactctattaaaatttggatttttgacacaact
gatggagatcctcgacttttacgttttcgaagtggacacagtgctcccccactttgcata
aggttctatgcaaatgggagacacattctatctgctggtcaggatcgtgcctttcgtctt
ttctctgtcatacaggaccaacaaagtagagagctctctcagcgtcatgtatccaaacga
gccaagaaacttcgggtaaaggaagaagaactgaaattgaagcctgttattgcctttgat
tgtgctgaaattcgggagcgggattggtgcaatgtggtaacttgtcatatggatactgca
caagcatatgtgtggaggcttcaaaattttgtcattggggagcatatcctgagaccatgc
ctggaaaatctaacacctgttaaggcctgcaccattagtgcatgtggcaactttgcaatc
ctaggaactgcgggtggctggatagagcgattcaaccttcaatcaggaattagccgagga
agttacatggatgtgtcagagagaggaagttgtgcccatgagagtgaagtggttggagtt
gcttgtgattccacaaatacccaaatgataagtgcaggatatcatggggatgtaaaggtt
tgggatttcaagggacgtgccttaaaattcagatgggaagttggttgtcctctggttaag
attgtttatcatcgacttaatggtctgttggctactgtggcagatgattttgttatccgt
ttgtttgatgccatggcactgagaatggttcgtaaatttgaaggtcatacagaccgtatt
acagatttatgtttcagtgaggatgggaaatggcttttgtcatccagtatggatgggacc
cttagaatttgggatgtcatcttagcaagacaaatagatgcagtgcatgttgatgtttct
atcacagcattgtctttgtcaccaaatatggatgtgctggcaactacccatgttgatcaa
aatggggtctatttatgggctaatcagtcaatgttctctggagcttctaacattgattct
tatgcaagtgggaaagaagttgtgaacgtaaagttactatctctatcttcagtagaaggt
tcaaatgttgagaatgaggacactgacaagcctattgtgaaccagtcagtctcaaatgaa
gcttcaacttttccggctttcagtcagcaaattccagatcttgttactctctcactgttg
cctaaaagccaatggcagagtttgatcaacttagacattataaaggtgcgcaataaacca
attgagcctccaaagaaacctgagaaggctcctttcttcttgccttcagttccatctctt
tctggagaaatattatttaaacccagtgaacctgtggatggggaggataccaaacctgac
aaagcagagagtgatgagagaaaagtaggcattccagtaactcaatttttggagcttctt
cagtcatcatctgaaatgaaaaatttttcagcgttcactgaatatatcaaaggtttatct
ccttcaaatttggatatggaacttagaatgtttcagataatagatgaggatgaggatgag
gaagaacttgtaaagagacctgagtttatttcaatcgagctgcttcttgactatttcatt
cacgaaatatcctgcagaaacaattttgagtttgtacaggccgtcacacgattatttttg
aagatacatggtgaaacaattaggtgcaattcaaaattacaggacaaggcaaggaagctc
ttagacactcagagtgcaatttggcagagagtagataaattgttccaaagtaccagatgc
atggtcactttcctcagtaattcacagttttaa
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