KEGG   Populus euphratica (Euphrates poplar): 105122825
Entry
105122825         CDS       T05872                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105122825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peu03019]
    105122825
Messenger RNA biogenesis [BR:peu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105122825
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     105122825
SSDB
Motif
Pfam: S1_RRP4 KH_6 ECR1_N RRP40_S1 EXOSC1
Other DBs
NCBI-GeneID: 105122825
NCBI-ProteinID: XP_011020438
UniProt: A0AAJ6XIQ1
LinkDB
Position
Unknown
AA seq 320 aa
MRGIEISLNQTQKIRLQRALKQLESLYLRANFNASVTVADTIPVSNEDTILKGHGTSERD
GEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIIVGRVVEVAQKRWKLEINFSQDAVLM
LSSMNLPDGIQRRRTALDELNMRSIFEENDVVCGEVRNFQNDGGIQLQARSQKYGKLEKG
QLLTIPPYLVKRQKHHFHHLEHYGVDLILGCNGFIWVGELVEARDCIEEDQLNNTEQQFT
KSNTTKEMPLETRRSICQIANAIRVLSILGFNVTLEVILETIDLSRTLNLGIDEMLGPEF
HVLVAEREAERRTSMTKRKG
NT seq 963 nt   +upstreamnt  +downstreamnt
atgagagggatagagatatcattgaatcaaacccaaaagataaggttgcagagagctctg
aaacagctagaatctttgtatttgagagccaacttcaatgcttctgtaactgtcgccgat
accatccccgttagcaacgaagacaccatcctcaagggtcatggcacctctgagcgcgac
ggagaagtggtggcgacgctctgtggtgtggtggagcgtgttaacaaattagtgtatgtt
cgcacgttgcgtgccaggtacaagccagagattggagatatcatagtggggcgtgttgtt
gaggtagcgcaaaagcggtggaaattggaaattaatttcagccaagatgctgttttgatg
ctttcttctatgaatttacctgatgggattcagaggcggcgaactgcattggatgaactg
aacatgcgcagtatttttgaggagaatgacgttgtgtgtggtgaagtgcgtaattttcag
aatgatggtggcatacaattgcaggcaagaagtcagaagtatggaaagcttgagaagggt
cagttgctcacgattccaccatatctagtgaaaagacaaaaacatcatttccatcatttg
gaacattatggagttgacctgatactaggatgtaatgggttcatttgggttggtgagctt
gtcgaggccagggactgtattgaagaggatcaactgaacaatactgaacaacaattcacc
aaatccaatacaaccaaagaaatgccactagagacgaggcggagcatatgtcagatagca
aatgctatccgtgtcttgtcaattttaggctttaatgtaactttagaagtgatactggag
actattgacttgagcaggacactgaatcttggaatagatgagatgcttgggccagagttc
catgttttggtagcagagagagaagctgaacgccgcacatcgatgacaaaaaggaagggg
tga

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