Populus euphratica (Euphrates poplar): 105122825
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Entry
105122825 CDS
T05872
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105122825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105122825
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105122825
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105122825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
105122825
NCBI-ProteinID:
XP_011020438
UniProt:
A0AAJ6XIQ1
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MRGIEISLNQTQKIRLQRALKQLESLYLRANFNASVTVADTIPVSNEDTILKGHGTSERD
GEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIIVGRVVEVAQKRWKLEINFSQDAVLM
LSSMNLPDGIQRRRTALDELNMRSIFEENDVVCGEVRNFQNDGGIQLQARSQKYGKLEKG
QLLTIPPYLVKRQKHHFHHLEHYGVDLILGCNGFIWVGELVEARDCIEEDQLNNTEQQFT
KSNTTKEMPLETRRSICQIANAIRVLSILGFNVTLEVILETIDLSRTLNLGIDEMLGPEF
HVLVAEREAERRTSMTKRKG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagagggatagagatatcattgaatcaaacccaaaagataaggttgcagagagctctg
aaacagctagaatctttgtatttgagagccaacttcaatgcttctgtaactgtcgccgat
accatccccgttagcaacgaagacaccatcctcaagggtcatggcacctctgagcgcgac
ggagaagtggtggcgacgctctgtggtgtggtggagcgtgttaacaaattagtgtatgtt
cgcacgttgcgtgccaggtacaagccagagattggagatatcatagtggggcgtgttgtt
gaggtagcgcaaaagcggtggaaattggaaattaatttcagccaagatgctgttttgatg
ctttcttctatgaatttacctgatgggattcagaggcggcgaactgcattggatgaactg
aacatgcgcagtatttttgaggagaatgacgttgtgtgtggtgaagtgcgtaattttcag
aatgatggtggcatacaattgcaggcaagaagtcagaagtatggaaagcttgagaagggt
cagttgctcacgattccaccatatctagtgaaaagacaaaaacatcatttccatcatttg
gaacattatggagttgacctgatactaggatgtaatgggttcatttgggttggtgagctt
gtcgaggccagggactgtattgaagaggatcaactgaacaatactgaacaacaattcacc
aaatccaatacaaccaaagaaatgccactagagacgaggcggagcatatgtcagatagca
aatgctatccgtgtcttgtcaattttaggctttaatgtaactttagaagtgatactggag
actattgacttgagcaggacactgaatcttggaatagatgagatgcttgggccagagttc
catgttttggtagcagagagagaagctgaacgccgcacatcgatgacaaaaaggaagggg
tga
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