KEGG T05872: 105122884

Populus euphratica (Euphrates poplar): 105122884

Entry

105122884         CDS       T05872

Name

(RefSeq) probable CCR4-associated factor 1 homolog 9

K12581

CCR4-NOT transcription complex subunit 7/8

Organism

peu Populus euphratica (Euphrates poplar)

Pathway

peu03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:peu00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105122884
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peu03019]
    105122884
Messenger RNA biogenesis [BR:peu03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105122884
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     105122884

SSDB

Motif

Pfam:

CAF1

Other DBs

NCBI-GeneID:

105122884

NCBI-ProteinID:

XP_011020551

UniProt:

A0AAJ6U0Z6

LinkDB

Position

Unknown

AA seq 262 aa
MNPLFNEREAGANPRYKAKAMALTMKSITPIHVREVWAENLVAEFSLIKEAISSFSFVSL
DTEFPGTLFLSNLDKSLLSQAPPSHNYRLMKCNVDILKIIQLGMTLSDSQGNLPSFGTEF
HYVWQFNFRDFNIQHDPYNDESIGLLERQGIDLKKNREKGLDSSDFAWIGLRGGLERVAK
LLGVERTTGRRHQAGSDSLLTQQTFVRFKDSCANLDLENLNGCEGMIFGLCEGWLGFDRR
PEVYNFETSTRLKPQFKEVFSV

NT seq 789 nt +upstreamnt +downstreamnt
atgaatccgttattcaatgaaagagaagcaggagccaatccccgctacaaagccaaagca
atggcgttaacgatgaagagcattacaccaatacatgtgcgcgaagtctgggcagagaac
ctcgtagctgagttttctctaatcaaggaagcaatctctagcttctccttcgtttcattg
gacactgaattccctggtactctctttctgtcaaatcttgacaagagtttgctgtctcaa
gcccctccttctcacaattaccgtctcatgaagtgcaatgttgatatcttgaaaataatt
cagcttgggatgaccctgtctgattcacaaggaaatcttccaagtttcggaacagaattc
cactacgtttggcagtttaatttccgggatttcaacatccagcatgatccttacaacgac
gaatctattgggttacttgaacgccaaggtattgatctcaagaagaacagagaaaagggt
ctcgattcctcagattttgcatggattggtttgcgcggtggattggagagggtggctaag
ttactgggtgtagaacggacaaccggaagaaggcaccaggcaggatctgatagcctatta
acccagcaaacattcgtgagatttaaggattcttgcgctaatcttgatcttgaaaacttg
aatggctgtgagggaatgatttttggactatgtgaaggctggctgggattcgatcgtaga
cctgaagtatacaattttgaaacctctacccggttgaaacctcagtttaaggaagtgttt
tcagtgtaa

DBGET integrated database retrieval system