Populus euphratica (Euphrates poplar): 105122990
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Entry
105122990 CDS
T05872
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105122990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105122990
03110 Chaperones and folding catalysts [BR:
peu03110
]
105122990
03029 Mitochondrial biogenesis [BR:
peu03029
]
105122990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peu04147
]
105122990
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105122990
Messenger RNA biogenesis [BR:
peu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105122990
Chaperones and folding catalysts [BR:
peu03110
]
Heat shock proteins
HSP60 / Chaperonin
105122990
Mitochondrial biogenesis [BR:
peu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105122990
Exosome [BR:
peu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105122990
Exosomal proteins of other body fluids (saliva and urine)
105122990
Exosomal proteins of breast cancer cells
105122990
Exosomal proteins of colorectal cancer cells
105122990
Exosomal proteins of bladder cancer cells
105122990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
CO_dh
Motif
Other DBs
NCBI-GeneID:
105122990
NCBI-ProteinID:
XP_011020718
UniProt:
A0AAJ6TZX1
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MHRFTSSLASKSRIARSTTKQIGSRLSWSRNYAAKDIRFGVEARAVMLKGVEELADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDAAGDGA
TCATVLTRAIFAAGCKSVAAGMNAMGLRRGISMAVESVVTNLKSRTRMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLSNELEVVEGLKLDRGYISPYFITDQK
TQKCELDDPLILIHDKKVSNLHAVVKVLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKATLQDLAVLTGGEVITEELGLNLEKVDLDMLGSCKKVTVSKDD
TVILDGAGDKKSIEERCEQIRSAVESSTSDYDKEKLHERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGAALLYASKELDKLQTANFDQKIGVQIIQNALKT
PVHTIATNAGVEGAVVVGKLLEQDNPDLGYDAAKDEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTETVVTELPKDENDAPAMGPGMGMDY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttcacttctagcctcgcttccaagtctcggattgctaggagcaccaccaaa
caaattggaagtaggttgagttggagcagaaactatgctgccaaagacataagattcggt
gtggaggctcgtgccgtgatgcttaagggtgttgaagagctagctgatgctgtcaaagtc
accatgggccctaagggtcgcaatgtggttattgaacaaagttttggggcccccaaagtg
actaaggatggtgtgactgttgcaaagagcattgagttcaaggataaagtcaagaatgtt
ggtgctagcctcgtgaaacaggttgcaaatgccacgaatgatgctgcaggcgatggggcc
acttgtgctacggtcctgactcgagcaatatttgctgcagggtgcaagtcagttgcagca
gggatgaatgcaatgggcctaagacgtggtatcagcatggctgtggaatcagttgttacc
aatttgaaaagcagaacaagaatgatcagcacatctgaagaaattgcacaagttggtaca
atatcagcaaatggggagagagaaattggtgagttgattgcaaaggccatggagaaggtt
gggaaagagggagttataacaattcaagatgggaaaacattatctaatgagttggaagtt
gttgagggattgaagcttgacaggggctatatatctccttatttcatcacggaccagaaa
acccaaaaatgtgaattggatgaccctctcattctgatccatgacaagaaagtctcaaat
ttgcatgctgtggtgaaagtactagagttggctttaaagagacaaaggcccttgctgatt
gttgctgaagatgtggagagtgaggcactggcaacacttattttaaataagcttcgtgct
ggaatcaaggtctgtgctattaaggcccctggatttggagagaacaggaaggctacattg
caggatcttgctgtcctcacaggaggcgaagttataactgaagagcttggcctcaatctt
gaaaaggtggatttggatatgcttggcagttgcaaaaaggttacagtatcaaaggatgac
accgttattcttgatggtgctggtgacaagaagtccattgaagaaagatgtgaacagatc
cgatctgcagtagagtcgagtacttctgactatgacaaagagaagttgcatgaaagactg
gcaaagctttctggtggtgttgctgtgctgaagattggaggagctagtgaagctgaagtt
ggtgagaagaaagatagagttacagatgctctaaatgccacaaaggctgctgtggaagag
ggtattgtgccaggaggtggtgctgcacttctttatgcatcaaaagagttggataagctg
caaactgccaactttgaccagaagatcggcgttcaaattattcagaatgccctgaagacc
cctgtgcatacaattgctactaatgcgggagtcgagggagccgttgttgttggtaagcta
ttggagcaggacaaccctgatctagggtatgacgctgccaaagatgaatatgttgatatg
gtgaaagctggcattattgacccgctgaaagtaattagaactgctttggtcgatgctgcc
agtgtctcctcgttgatgacaacaactgagactgttgtaactgagcttccaaaggatgaa
aatgatgctccggcaatgggtccaggcatgggcatggattactga
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