Populus euphratica (Euphrates poplar): 105123032
Help
Entry
105123032 CDS
T05872
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105123032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105123032
03041 Spliceosome [BR:
peu03041
]
105123032
03036 Chromosome and associated proteins [BR:
peu03036
]
105123032
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105123032
Spliceosome [BR:
peu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105123032
Complex B
105123032
Complex C
U2 SnRNP specific factors
105123032
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105123032
TFTC complex
105123032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
105123032
NCBI-ProteinID:
XP_011020823
UniProt:
A0AAJ6U046
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MYLYSLTLQRATGIVSAINGNFSGGKAQEIVVARGKVLDLLRPDENGKLQTVLSVEIFGA
IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKERNVFDKIHQETFGKSGCRRIVPGQYL
AVDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTICYSVCGVDCGFDNPI
FAAIELDYSEADQDSTGQAASEAQKNLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGILVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQ
TEYGDIFKVTLDHENDKVKELKIKYFDTIPVTSSICVLKSGFLFAASEFGNHALYQFQAI
GEEEDVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVANLFDEETPQ
IFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKRNLNDEFDAYIVVSFNNAT
LVLSIGETVEEVGDSGFLDTTPSLAVSLIGDDSLMQIHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRVLSLDPDDCMQILSVQSVSAPPESLLFLEVQASIGGEDGADHPASLFL
NAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFAINVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIPLRYTP
RKFVLQPKRKLLVIIESDQGAYTAEEREAAKKECFEAAGMGENGSASAEKMENGDDDDKD
DPLSDEQYGYPKAEADRWVSCIRVLDPRSATTTCLLELQDNEAAFSLCTVNFHDKEHGTL
LAVGTAKGLQFWPKRSLIAGFIHIYKFVDDGKSLELLHKTQVEGVPLALCQFQGRLLAGI
GSVLRLYDLGKKRLLRKCENKLFPNSIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYI
FADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN
GAPNKVEEIVQFHIGDVVNCLQKASLIPGGGECIMYGTVMGSVGALLPFTSRDDVDFFSH
LEMHLRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDAQRKIADELDRTPGE
ILKKLEEVRNKII
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacagcctcactctccaacgagctaccggaatcgtttccgccataaacggc
aacttctccggcggcaaagcacaagaaatcgttgttgctcgcggcaaagttctcgatctc
ctccgacctgacgagaacggtaagctacaaacagttctctctgttgaaatattcggtgct
attcgctcattagctcagtttagactaactggagctcaaaaagattatattgttgttggt
tccgattcgggcaggattgtaattttagaatataacaaggagagaaatgtctttgacaaa
attcatcaagaaacttttggaaaatctggttgtcgccgtattgttccgggtcagtatttg
gctgtggatccgaaaggaagggctgttatgattggtgcctgtgagaaacagaagctagtt
tatgttttgaatagagatactgttgctaggttaaccatttcttcgcctttagaggcacat
aagtcgcatactatatgttactcagtatgtggtgttgattgtgggtttgataatccgatt
tttgctgcgattgagttggattattcggaagctgatcaggactcgacagggcaagctgct
agtgaagcgcagaagaatttgacattttatgagcttgatctggggcttaatcatgtgtct
aggaaatggtctgagcaggttgataatggcgctaatatgcttgttacagtacctggaggt
ggtgatgggccaagtgggattttagtttgtgcggagaatttcgtgatttataagaatcaa
gggcatcctgatgtgagggctgtgattcctaggcgtgctgatttgcccgctgaacgtggg
gttttgatagtttctgcagcaacacataagcagaaatcgatgtttttctttttgttgcag
actgagtacggtgacatttttaaggttacactggatcatgagaatgacaaggttaaggag
ttgaagattaagtattttgacacgatcccggttacttcttcgatatgtgtgttgaaatca
gggtttttgtttgctgcgtcagagtttgggaatcatgcattgtatcagtttcaggccatt
ggggaggaagaggatgtggaggcctcctctgctactttgatggaaaccgaggaaggcttc
cagcctgtttttttccagccaagagggttaaagaatcttgttaggattgaccaggttgag
agcttgatgcctattatggacatgaaggttgctaatctttttgatgaagaaacccctcag
atattttcactttgtgggcggggtcctcgctcctcattgaggatactgaggcctggtttg
gctattagtgagatggctgtgtcacagcttcctggtgtaccaagtgctgtttggactgtg
aaaaggaatcttaatgatgagtttgatgcatatattgttgtgtccttcaacaacgcaact
cttgtgctttcaattggagaaacagttgaggaagttggcgatagtgggtttcttgatacc
acaccttcccttgctgtttctttaattggtgatgattctttgatgcaaattcacccaaat
ggcataagacatattagggaagatgggcgtattaatgagtggagaactcctggaaagagg
acaattgtgaaagttggctcaaatagacttcaagtggttattgctttaagtggaggagag
cttatatattttgaggtggatatgactggtcagctaatggaggtggagaagcatgagatg
tctggagatgtggcctgtttggacattgcccctgttccagaaggaagacagaggtctcga
ttcctagcagttggttcgtatgataacaccatccgtgtcttgtctttggatcctgatgac
tgtatgcagattctgagtgtgcaaagtgtttcagcgcctccagaatccctcctgtttctt
gaggttcaggcatcaattggtggtgaagatggtgctgatcaccctgccagtcttttcctc
aatgctggtttgcagactggggttctctttaggacagtggtggatatggtgacaggccag
ctttctgactcccgttcccggtttttggggttgagggccccaaaactttttgccattaat
gtgagaggtcgacgtgcgatgctgtgcttatctagccgaccttggcttggttatattcac
caagggcattttctgttaacgcccctttcatatgaaactcttgagtatgctgcttcattc
tcatctgatcagtgtgcagaaggtgtggttgctgtcgctggggatgcattgaggattttt
acaattgagagattgggagaaacattcaatgaaactgcaatacctctaagatacactcca
agaaagtttgtgcttcaacctaagcggaaattgttggtcattattgagagtgatcaagga
gcatatacagcagaggagcgtgaagcagcaaaaaaggagtgctttgaagctgctggaatg
ggggaaaatggcagtgccagcgctgagaagatggaaaatggtgatgatgatgataaagat
gaccccctctctgatgagcagtatggttatccaaaggctgaggcagacaggtgggtttct
tgcattagagtacttgacccaaggtcagctactactacgtgcttgctggaacttcaggac
aatgaagctgcttttagcttatgcactgtaaatttccacgacaaggagcatggaactctc
ttagctgttggtacagccaagggactgcagttttggcccaaaagaagcttaattgctggg
ttcattcacatttataaatttgtggatgatggtaaaagcctggaactcttgcataagaca
caagtagaaggagttccacttgctttgtgtcagtttcagggaagattacttgcaggaata
gggtccgtgcttagattgtatgacttggggaaaaaaaggctgcttagaaaatgtgagaat
aagctgttccccaactccattgtctctattcacacctatcgtgatcggatttatgtgggg
gacattcaagaatcatttcatttctgcaagtacaggcgggatgaaaatcagctgtatatt
tttgctgatgacagtgttccaagatggcttacagcttcataccatgtagattttgatacc
atggctggtgcagacaagtttgggaatatctactttgtgaggttgccgcaggatgtttct
gatgagatagaagaagatccaactggcggaaagataaagtgggagcagggaaagcttaat
ggagctccaaacaaggtagaggagatagtacagtttcatattggcgatgtggttaattgc
ttgcagaaggcatctctaattccaggcggtggagaatgcatcatgtatgggacagtgatg
gggagtgtgggggccctacttccattcacctctcgagatgatgttgacttcttttcacac
ttggagatgcatttgagacaagaccacccacctttgtgtggaagagatcatatggcatat
aggtctgcttattttcctgttaaggatgtgatcgatggagacctatgtgagcagttcccg
actttgccgcttgatgcacaaagaaaaattgcagatgagctggacagaactcctggggag
atactcaagaaacttgaagaagttcgaaacaagatcatctga
DBGET
integrated database retrieval system
