Populus euphratica (Euphrates poplar): 105123220
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Entry
105123220 CDS
T05872
Name
(RefSeq) uncharacterized protein LOC105123220
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105123220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105123220
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105123220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
105123220
NCBI-ProteinID:
XP_011021033
UniProt:
A0AAJ6U0J4
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MTRTRKTPKNPQELGEAEKGKNGFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGEL
RSGACRTKKRRPWEMVFCIYGFPTNVAALQFEWAWQHPTESVAVRQAVAGFKSFSGVANK
IKLAYTMLNLPSWQSLNITINHFSTNYKVHSVGCPSLPTNMKVQICPMDELPCYCDSGDI
LFEERENEDAWDGEEEYKRASDGSGAVEANLVELEVSSLDELPCYNGREDNIFEGGYGET
ASREACNRSEPVHEKYNESVNTRGTVKEAHADIIVHITADFARSIDKTSNEHFRCFEEYD
QQDRREPPFPELDHANPFPFMNLQARKASSIAPSFSKSETGDRGVLTLIDEEVSELDWQR
AKKLVIDKDDEASNTCENVNVDNHSSVDAHCINKASREQFGLSEPYVMQDQRAPPSPVLD
YAEPFGFMNQPSSKASSSIVTNFSARENGGVLTLIGEDASEFDWPRWKKLSCKVINDKDQ
VLIPRSFIPREIEVIDLLSPSPECRIRSANKKRRVSPVYPVIIDLT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaacgagaaaaaccccaaaaaatcctcaagaactaggagaagcagagaaggga
aagaatgggtttttcgcttgctatctcttgacttctctctgcccccgattcaaaggccac
acctacatcggatttacagtgaatccgcggcggagaattaggcaacataatggcgagctt
agaagtggagcatgcaggactaagaaaagaaggccatgggaaatggttttctgcatttat
ggtttcccaactaacgttgctgctttgcagtttgaatgggcgtggcagcacccaacagaa
tcagtggcagtgaggcaggcagttgctggttttaaatccttctcgggagttgccaacaag
attaaacttgcttacacaatgcttaacctcccgtcgtggcagagcttgaacatcaccata
aaccatttctcaacgaactacaaagtacactctgttggttgtccaagcttgccaacgaac
atgaaggtccaaatttgccccatggatgagctgccctgctattgtgattcgggggatatt
ttatttgaagagagagaaaatgaagatgcctgggatggtgaagaggaatataagagagct
agtgatggaagtggagctgtcgaggcaaacttggtggaacttgaagtttcctccctggat
gagcttccatgctataatggaagggaggataatatttttgaaggtggatatggtgaaacg
gcatccagggaagcttgtaacagaagtgagcccgtacacgaaaaatataatgaatctgtt
aacacacgaggaactgttaaagaagcacatgcagatattatagtccatattactgcagat
tttgcacgtagcattgacaagacttccaatgagcatttcagatgctttgaagaatatgac
cagcaagaccgaagggaaccaccctttccagaactggatcatgcaaatccatttcctttc
atgaatttacaagcaagaaaagcttcttcaattgctcctagcttttcaaagagcgagact
ggagataggggcgtattgacattgattgatgaggaggtttctgaattggattggcagagg
gctaagaaattagttattgacaaagatgatgaagctagcaacacctgtgaaaatgtgaac
gtggataatcattcgtctgtagatgcacattgtattaacaaggcttctcgtgaacaattt
ggactgtctgaaccatatgtcatgcaagaccaaagagcgccaccctctccagtactagat
tatgcagaaccatttggtttcatgaatcagccatcaagtaaagcatcatcttctattgtc
acaaacttttctgcgagggagaatgggggtgtattgacattaatcggcgaggatgcttct
gaatttgattggccaagatggaagaagctttcttgcaaagtaatcaatgataaagatcaa
gtcctgattccaaggtcattcattcctcgggaaattgaggttatagatttgctgtcccca
tctccagaatgcagaattaggtcagccaacaagaagagaagagtttctcctgtgtatccg
gtaattattgacttgacttag
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