Populus euphratica (Euphrates poplar): 105123946
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Entry
105123946 CDS
T05872
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03420
Nucleotide excision repair
peu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105123946
09124 Replication and repair
03420 Nucleotide excision repair
105123946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
peu03051
]
105123946
03400 DNA repair and recombination proteins [BR:
peu03400
]
105123946
Proteasome [BR:
peu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105123946
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105123946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_RAD5A
CUE
Crinkler
UBA_3
OTU1_UBXL
Ubiquitin_4
Rad60-SLD_2
TECR_N
Motif
Other DBs
NCBI-GeneID:
105123946
NCBI-ProteinID:
XP_011022044
UniProt:
A0AAJ6XKM3
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MKILVKTLKGSTFDIEVRPEDTVADVKKNIETAQGVAVYPAEQQMLIHQAKVLKDNTTLD
ENKIVENSFVVIMLSKTKSSSGDGSTAPTAPTTKAPTTSTMASTTGPQAPTLTSAPPASA
PAPAPVSSVAPASDYVYDQAASSLVAGNNLEVAVQQILDMGGGTWDRDTVVRALRAAYNN
PERAIEYLYSGIPEQAEAPPVAQIPIGRQAPAAQPQQHPTQTAAVPSGGPNANPLDLFPQ
GLPIVGSGAGGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRFIQEHQ
DDFLRLINEPVESGEGNVLGQLAAAMPQAVTVTPEEREAIERLEAMGFDRALVLEVFFAC
NKNEELAANYLLDHMHEF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttagttaagaccctgaaaggcagtacttttgacatcgaagttagacctgaa
gacacggttgctgatgtcaaaaagaatatagaaacagctcaaggggtagccgtttatcct
gccgagcagcaaatgcttattcaccaggccaaagttcttaaagataacaccactttggat
gaaaataaaattgttgaaaatagttttgttgttatcatgttatcgaagactaagagctca
tccggtgatggttcaactgcaccaactgcccctaccactaaggcacctacaacaagtacc
atggcatcaacaacaggacctcaagctcccacattgacatctgcaccgccagcatcagct
cctgctcctgctccagtttcttcagttgctcctgcgtcagactatgtttatgaccaagca
gcatctagtctggttgcgggaaataacttggaggtagcagtccagcaaattcttgacatg
ggtggagggacttgggatagagatactgttgttcgtgctcttcgggctgcttacaataat
ccagagagagccattgaatatttatattctggtatcccagaacaagcagaagctccacca
gtggctcaaatccctataggcaggcaagctcctgcagcccagcctcagcagcatccaaca
caaactgctgcagttccttctggtgggccaaatgcaaatcctttagatcttttcccacag
ggccttcccatcgtgggttcaggtgctggtggagcaggaactcttgattttttgcggaac
agtcaacagttccaagccttgcgagctatggtgcaggctaacccccagatactgcagcct
atgcttcaagagctgggaaaacaaaatcctcacttaatgaggtttattcaagagcaccaa
gatgattttctccgcttgatcaatgaacctgttgaaagtggagaggggaatgtgttgggg
cagcttgctgcagcaatgccacaagctgtaacagtcactcctgaggagcgcgaggcaata
gaacgtcttgaagctatgggttttgatcgtgcacttgtattggaggtattctttgcctgc
aacaagaatgaggagctggctgccaactacctcttagatcacatgcatgagttttga
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