Populus euphratica (Euphrates poplar): 105124759
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Entry
105124759 CDS
T05872
Name
(RefSeq) LOW QUALITY PROTEIN: UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105124759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105124759
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
105124759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2043
UVSSA_N
Motif
Other DBs
NCBI-GeneID:
105124759
NCBI-ProteinID:
XP_011023175
UniProt:
A0AAJ6U4V0
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All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MEEDAGKVRALIEKATNSTAAHVDPRLLKGIKTVVRYSDSELLLAAQILMDSMKSDHSQV
RYLTLLIIDELFMRSKLFRALVVENLDKLLSLSVGFRRNHPLPAPLAFASVLRLKAIEFL
EKXNSSFGIHYRQIRLGFDYLKNTLRFQFPNVQANAARVQQERREREMRTKEILLNKFEA
LKENLSSLKEEIRETVDEIGGCLEIVKNKEENVVIGALDDDGDFEEFHPLELRQLRLDLL
KEGENVCESSENKVVFDALRELYKLLVTKHLVSVQEGISILIRVEVEDLRLRDSMLKEFI
DIRNHLQSLKKICVESGCVLPDITKHEKEEEEDFWEEGKVESTGLGSFSEPNKRSENSSA
PSTSGEVKSEPSECSTKKLKHDESLGCEGGGTDSSSLRSKLMAEAPVIEWGSFLDTWGSN
RDVLANHRGLELETHWGRVDHDAVILAKKIAELNLQATLYKEDRVEIQPCRAPLRKGGLC
QRRDLRVCPFHGSIIPRDDEGNPINQDTSSSDVNLDLGTDLVNQIAKEAVKNVWDRDNEE
ARKRKMDKQSQQRAKLAKIREHNEAVLRDAAVASTSGSSANGDDFEASRRDSLLARNKME
TLASMLHKKVTTKDRLCRRFLNTRASDAMTRQLTLGEDANYREAFPNQC
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatgcgggaaaagtgagggcgttgatagagaaggccaccaattccacggcg
gcccatgtcgacccccgcctcctcaaaggcatcaaaacggttgtccgatactctgactcg
gagctcctactcgccgcccaaatcctaatggatagcatgaaaagcgaccactcccaggtt
aggtatttgacgcttctaataattgatgaactatttatgcgatcaaagctatttagagct
ctagttgttgagaatttagataagctattaagtttaagcgtgggatttagaagaaaccat
ccacttcctgctccactggcatttgcgtccgttttgcgtttaaaagcgattgaattcttg
gagaaatgaaattcttcttttggaattcattacagacagattagattaggttttgattac
cttaaaaacacgctccggtttcagtttccaaatgttcaggccaatgcagcacgagttcag
caggagaggagggaaagggagatgaggacgaaagagatcttacttaacaagtttgaggct
ttgaaggagaatttatcctcgttgaaggaggaaattcgggaaactgttgatgagattggg
gggtgtttagagattgtgaaaaataaagaggagaatgtggtgattggtgctttagatgac
gatggtgattttgaagagtttcatcctttggagttgcgtcagctccggcttgatttgttg
aaagagggggagaatgtctgcgagagtagtgagaataaagtggttttcgatgcattgagg
gagctgtacaagctcttagtgacaaagcatttggtttcggtccaagaaggaatctctatt
ctaatcagggttgaagtggaagatttgagattaagagattctatgctcaaggagttcatt
gacatccgaaatcaccttcaatcattgaagaagatatgtgttgaatcaggttgcgttctt
ccagacattacaaagcatgagaaagaagaggaagaagatttttgggaggagggtaaggtt
gaatcaactggccttgggagttttagtgaacccaacaaacgatctgaaaactcttctgca
ccatcgacttctggagaggtgaaaagtgaaccttctgaatgcagcaccaagaagttgaaa
catgacgagtctctgggttgtgaaggtggtggaactgattccagctctcttcgaagtaag
ctcatggctgaagctccagtgatagagtggggctcttttttggacacttggggttcaaac
agggatgttttagccaaccacaggggcttggagcttgaaactcactggggtagggtggac
catgatgcagttattctagcaaagaaaattgcggaattgaaccttcaggctactctttac
aaagaagaccgagttgaaatccagccatgtcgagctccattacggaagggtggactctgt
cagagaagagatttgagagtttgcccctttcacggatccatcattccccgtgatgatgaa
ggaaatcctatcaatcaggacacttcaagtagtgacgtgaatcttgatttagggactgat
ttagtaaaccaaatagccaaagaagctgtgaagaatgtttgggacagagataatgaggaa
gcaaggaaaagaaaaatggacaaacagtcgcagcaacgagctaagcttgcaaagatacga
gagcataatgaagctgttctgagggatgctgcagtggcttcaacttccggatcttcagct
aatggggacgatttcgaggcatcgaggagggacagtttgttggctagaaacaaaatggaa
actctcgcatcaatgttgcacaagaaagtaaccaccaaagataggttgtgtcggagattc
ttgaataccagggcaagtgatgcaatgacaaggcagcttacactgggagaagatgctaat
tatagagaagcctttccaaatcaatgttag
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