Populus euphratica (Euphrates poplar): 105125092
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Entry
105125092 CDS
T05872
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105125092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105125092
Spliceosome [BR:
peu03041
]
Common components
Common spliceosomal components
SR proteins
105125092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
105125092
NCBI-ProteinID:
XP_011023693
UniProt:
A0AAJ6XLU3
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MSRASRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDA
IRGRDGYNFDGCRLRVELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRSDYRVLVTGLPSS
ASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAY
VRVREYDSRRSYSRSPSRSSYVSRSRSRSRSGGYSDRSWSKSPRAKHSRRSRSVSVSSRS
HAGSSPRSFSRSLSRSRSPLASPPRRRHGHRTPSISPGRVSRSPSVRSDRSSSVDSDR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagcaagtcgaacactttacgtcgggaatcttcctggcgatattcgcctgagg
gaagttgaagatttgttttataagtatgggcccattgttgacattgatttgaaaatcccg
ccaaggcctccgggctatgcttttgttgagtttgaagaagctcgcgatgctgaagatgca
attcgtggccgggatggatataattttgatgggtgtagattacgagttgagcttgcccat
ggtgggcgaagacattcatcaccagtggaccattatagcagttacagtggtagcagtggt
agccgtgggccttccaagcgctctgactatcgtgtgttagtgactggattgccttcttct
gcttcatggcaagacctaaaggatcatatgcgtcgagccggtgatgtctgcttttctcaa
gtctttcgtgatcgtggtggcatgacaggaattgtggactacacaaactatgatgacatg
aaatatgctatcaagaagctcgatgactctgagttccggaatgcattttcaagggcatat
gttcgggtgagggagtatgattctaggaggagttactctaggagccccagtcgcagttca
tacgtgtcaagaagtcggagtcgaagtcgcagtggaggctatagtgacaggagctggagc
aagtcgcctagggcaaaacattcacggcgttctcgatctgtatctgtttcctctcgctct
catgcaggatcatctccacgatctttttcgaggtccctttcaagatcaagatctcctctt
gcttctcctcctcgcagaagacatggccacagaaccccaagcataagtcctggtcgcgta
tcccgttcgccttctgtgaggtctgatcgaagcagttcggtggactcagatcgttga
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