Populus euphratica (Euphrates poplar): 105125278
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Entry
105125278 CDS
T05872
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105125278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105125278
03036 Chromosome and associated proteins [BR:
peu03036
]
105125278
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105125278
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105125278
PBAF complex
105125278
GBAF(ncBAF) complex
105125278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
105125278
NCBI-ProteinID:
XP_011023954
UniProt:
A0AAJ6XMB9
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MSKIMEPTAHSDPNLNPIRPNEPELDLYTIPSYSSWFSWHDIHETERVALREFFDGSSIT
RTPKIYKEYRDFIINKYREDPSRRLTFTEIRKSLVGDVSLLNKVFLFLNNWGLINFSCEK
NEEIGLGSGNVDVRVEDGAPNGVRIVEMPDKLKPISVGSVQSSAEGSGGGGSGSGLKLPP
LASYSDVFGELVGKKKEVVCGNCGGSCDSGQYEYSKGDYLICQKCFNDGSYGENKSKDDF
KLKDSASNAAVWTEEETLRLLESVSRHGNDWDLVAQNVKTKTKLDCISKLIELPFGDLLL
SSTYGKGNSSGQIGSTNNSIQVPAAPSEHQDDTKHEDQLHEQMNANEEKGDVMDDGPLLK
RRRITSVSDAGGSLMKQVALISTMVGPDITAAAAEAAVAALCDETACPREIFDGEEDFPS
NGFSSPSFHSKSKRVDEVDASEVKQTPTQSGTEEASAWQNDIPLSLRLRAAVATTLGAAA
AHAKLLADQEDREVENLMATIVETQLKKLHHKIKHFDDLELIMEKEYAEFDELTESLTEE
RIDVLQRAIRAGISKSRDHAPIKFHMSNVV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaattatggagccaacagcacactccgacccgaatctaaacccgatccgacca
aacgagccagagctcgacctctacaccatccccagctattcaagttggttttcatggcac
gatattcacgagacagagagagtcgctttaagagaattcttcgatgggagctcaataacg
agaactccaaaaatctacaaagaatacagagactttataatcaacaagtaccgtgaagat
ccttccagaaggttaacattcacggagattcgaaagtcactggttggtgacgttagtttg
ttgaataaagtttttctgtttttgaataattggggattgattaattttagttgtgaaaag
aatgaggaaattggtttgggttcgggtaatgttgatgttcgggttgaagacggggctccg
aacggagttcggattgtggagatgcctgataagttgaaaccaatttcggtggggtcggtg
caaagtagcgcagagggtagtggtggtggtgggagtgggagtgggttgaagttgccgcct
ttggcgtcctattcggatgtttttggcgagttagttgggaagaagaaagaggttgtttgt
ggaaattgtggtggaagttgtgattccggccaatacgagtatagtaagggtgattactta
atctgtcaaaaatgctttaatgatggaagttatggcgagaacaagtctaaggatgatttc
aagcttaaggatagtgctagcaatgcagctgtgtggactgaggaggagactttgcgtctt
ttagaatctgtttcgaggcatgggaatgactgggacctggttgctcaaaatgttaaaacc
aagactaaacttgattgtatttctaagctcattgagctgccatttggggatcttttattg
agttctacatatggaaagggcaattctagtggacagattgggagcacaaacaactcaata
caagttcctgcagctccatctgagcatcaagatgataccaaacatgaagatcaattgcat
gagcagatgaatgcaaatgaggagaagggagatgtcatggatgatggtccccttttgaaa
agaagacgcatcacttctgtttcagatgctggcggctctctgatgaaacaggtagctctc
atctcaaccatggttggcccagatatcacagctgctgcagctgaggctgctgttgcagca
ctttgtgatgaaactgcatgtccaagagagatatttgatggcgaagaggattttccttct
aatgggttttcttctccctccttccattccaagtcgaagagagttgacgaggttgatgcc
tcagaggtgaagcaaacacccactcagtcaggaactgaggaggcatctgcatggcagaat
gacatacctctatctttgcgtcttagagctgctgttgcaacaactcttggggcggctgct
gctcatgctaaattactggcagatcaggaagaccgagaagttgagaatttaatggcaacc
atagttgagacacagttgaagaaactgcaccacaaaatcaagcactttgatgatctggag
ctgataatggagaaggaatacgctgaattcgatgaactaacagagtccttgaccgaggag
cggattgatgtcttgcaaagggccattcgtgcaggcatatctaaatcaagggatcatgct
cccataaaatttcacatgtcaaatgtagtttga
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