KEGG   Populus euphratica (Euphrates poplar): 105125278
Entry
105125278         CDS       T05872                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3A
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105125278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peu03021]
    105125278
   03036 Chromosome and associated proteins [BR:peu03036]
    105125278
Transcription machinery [BR:peu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     105125278
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    105125278
   PBAF complex
    105125278
   GBAF(ncBAF) complex
    105125278
SSDB
Motif
Pfam: SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 105125278
NCBI-ProteinID: XP_011023954
UniProt: A0AAJ6XMB9
LinkDB
Position
Unknown
AA seq 570 aa
MSKIMEPTAHSDPNLNPIRPNEPELDLYTIPSYSSWFSWHDIHETERVALREFFDGSSIT
RTPKIYKEYRDFIINKYREDPSRRLTFTEIRKSLVGDVSLLNKVFLFLNNWGLINFSCEK
NEEIGLGSGNVDVRVEDGAPNGVRIVEMPDKLKPISVGSVQSSAEGSGGGGSGSGLKLPP
LASYSDVFGELVGKKKEVVCGNCGGSCDSGQYEYSKGDYLICQKCFNDGSYGENKSKDDF
KLKDSASNAAVWTEEETLRLLESVSRHGNDWDLVAQNVKTKTKLDCISKLIELPFGDLLL
SSTYGKGNSSGQIGSTNNSIQVPAAPSEHQDDTKHEDQLHEQMNANEEKGDVMDDGPLLK
RRRITSVSDAGGSLMKQVALISTMVGPDITAAAAEAAVAALCDETACPREIFDGEEDFPS
NGFSSPSFHSKSKRVDEVDASEVKQTPTQSGTEEASAWQNDIPLSLRLRAAVATTLGAAA
AHAKLLADQEDREVENLMATIVETQLKKLHHKIKHFDDLELIMEKEYAEFDELTESLTEE
RIDVLQRAIRAGISKSRDHAPIKFHMSNVV
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgtccaaaattatggagccaacagcacactccgacccgaatctaaacccgatccgacca
aacgagccagagctcgacctctacaccatccccagctattcaagttggttttcatggcac
gatattcacgagacagagagagtcgctttaagagaattcttcgatgggagctcaataacg
agaactccaaaaatctacaaagaatacagagactttataatcaacaagtaccgtgaagat
ccttccagaaggttaacattcacggagattcgaaagtcactggttggtgacgttagtttg
ttgaataaagtttttctgtttttgaataattggggattgattaattttagttgtgaaaag
aatgaggaaattggtttgggttcgggtaatgttgatgttcgggttgaagacggggctccg
aacggagttcggattgtggagatgcctgataagttgaaaccaatttcggtggggtcggtg
caaagtagcgcagagggtagtggtggtggtgggagtgggagtgggttgaagttgccgcct
ttggcgtcctattcggatgtttttggcgagttagttgggaagaagaaagaggttgtttgt
ggaaattgtggtggaagttgtgattccggccaatacgagtatagtaagggtgattactta
atctgtcaaaaatgctttaatgatggaagttatggcgagaacaagtctaaggatgatttc
aagcttaaggatagtgctagcaatgcagctgtgtggactgaggaggagactttgcgtctt
ttagaatctgtttcgaggcatgggaatgactgggacctggttgctcaaaatgttaaaacc
aagactaaacttgattgtatttctaagctcattgagctgccatttggggatcttttattg
agttctacatatggaaagggcaattctagtggacagattgggagcacaaacaactcaata
caagttcctgcagctccatctgagcatcaagatgataccaaacatgaagatcaattgcat
gagcagatgaatgcaaatgaggagaagggagatgtcatggatgatggtccccttttgaaa
agaagacgcatcacttctgtttcagatgctggcggctctctgatgaaacaggtagctctc
atctcaaccatggttggcccagatatcacagctgctgcagctgaggctgctgttgcagca
ctttgtgatgaaactgcatgtccaagagagatatttgatggcgaagaggattttccttct
aatgggttttcttctccctccttccattccaagtcgaagagagttgacgaggttgatgcc
tcagaggtgaagcaaacacccactcagtcaggaactgaggaggcatctgcatggcagaat
gacatacctctatctttgcgtcttagagctgctgttgcaacaactcttggggcggctgct
gctcatgctaaattactggcagatcaggaagaccgagaagttgagaatttaatggcaacc
atagttgagacacagttgaagaaactgcaccacaaaatcaagcactttgatgatctggag
ctgataatggagaaggaatacgctgaattcgatgaactaacagagtccttgaccgaggag
cggattgatgtcttgcaaagggccattcgtgcaggcatatctaaatcaagggatcatgct
cccataaaatttcacatgtcaaatgtagtttga

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