Populus euphratica (Euphrates poplar): 105125313
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Entry
105125313 CDS
T05872
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peu03009
]
105125313
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
90S particles
Other 90S particles
105125313
Pre-60S particles
Other pre-60S particles
105125313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
WD40_RFWD3
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
EIF3I
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
105125313
NCBI-ProteinID:
XP_011024002
UniProt:
A0AAJ6XM48
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MIAAVSWVPKGVAKSVPSVADPPSKEEIEELIKASDLERSREDSGSEEDDQEMDVDAAKQ
TGEVSQALAVASALGRSSKVNKSETKFDDIADGLQELDMDNYDDEEDGIELFSTGLGDLY
YPSNSMDPYIKDEDDDDSEDLEDMAIKPKDAVIVCACNKDEFSNLEVWILDETSDGDSNI
YVHHEVPLSAFPLCTAWLDCPLKGGEKGNFIAVGSMEPAIEIWDLDIIDEVQPAVVLGGI
EEKKKKKGEKVPIKYKEGSHTDSVLGLAWNKHFRNILASASADKQVKIWDVDAGKCDITM
EHHTDKVQAVAWNHHEPQVLLSGSFDRSVVMKDGRLPSDPGFKWSVTADVESLAWDPHDK
HLFVVSLEDGTVQGFDIRAAKCGSASDLKPSFTLHAHDKAVCTISYNPLAPNLLATGSTD
KMVKLWDLSNNQPSCLVSKNPKAGAIFSVSFSEDNPFLLAIGGSKGTLELWDTLSEAEVA
RRFGTTAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcagtttcgtgggtacccaaaggggttgcaaagtctgtaccaagtgtagca
gacccaccttcaaaagaggaaattgaagagctgatcaaagctagtgatttagagagaagt
agagaagatagtggcagcgaggaagatgaccaggaaatggatgttgatgctgccaagcag
accggtgaagtaagccaagcattagctgtagcaagtgcacttggcagaagttccaaagtt
aacaagtcagagaccaaatttgatgacatagcagatggtctgcaggaacttgatatggac
aactatgatgatgaggaggatggtattgagctgttcagcacaggacttggggacctttac
tacccaagtaatagcatggacccgtacatcaaggatgaagatgatgatgattctgaagat
cttgaagacatggctatcaaaccaaaggatgcagtcattgtttgtgcatgcaacaaggat
gaatttagtaaccttgaggtttggatattggatgaaacaagtgatggtgattcaaacata
tacgttcaccatgaggttcccctttcagcatttcccctttgcacagcatggcttgattgt
ccacttaaagggggagaaaaagggaattttatagctgttgggtcaatggaacctgccatt
gaaatatgggaccttgacattattgatgaagtgcaaccagctgtggtattaggtggcatt
gaagagaaaaaaaagaaaaaaggggaaaaggtgccaattaaatacaaagaaggcagtcac
actgattctgtccttggtcttgcttggaacaagcatttcaggaacatccttgccagtgct
agtgccgacaaacaagtcaaaatttgggatgtggatgctggaaaatgtgacattaccatg
gagcatcatacagacaaggttcaagcagttgcatggaatcatcatgagccacaagttctt
ctcagtggatcctttgatcgttcagtagtcatgaaggatggaaggttgccttcagatcct
ggtttcaagtggtcggtcacagctgacgttgaaagcttggcctgggatccgcatgataag
catttatttgtggtgagtcttgaagatggtacagttcaaggttttgacatccgtgctgcc
aagtgtggatcagcttctgaccttaagcctagttttaccctccatgcacatgacaaagct
gtttgcacaatctcttataatcctttagcacctaatcttcttgctactggatcaacagat
aaaatggtaaaactctgggatctgtccaacaaccaaccctcgtgtttagtatccaagaat
cctaaagcaggagctatcttttctgtttccttctcagaggacaacccttttctgctcgct
attggaggctccaaggggacattggaactatgggatacattgtctgaggccgaggttgct
agaagatttggaaccacagcaagctga
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integrated database retrieval system
