Populus euphratica (Euphrates poplar): 105125344
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Entry
105125344 CDS
T05872
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peu03009
]
105125344
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
105125344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_HPS5
WDR54
Beta-prop_Vps41
Beta-prop_WDR19_1st
VPS8_N
Beta-prop_IFT122_1st
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
105125344
NCBI-ProteinID:
XP_011024048
UniProt:
A0AAJ6U682
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MGKGKGSDEVLVVCSDRNMGTGIAMWDMETGDRIMHIPTCASPLHGLLCLRDQFLVASQV
NKHGSVGGGAIFTWSLNKPQQPLRSYPLEAIGPLGCTKDGLFLAGGSPSGNVYLWEVAGG
RLLKTWRAHSRCLKCLIFSNDDSLLISGSEDGVVCVWSMVSLLDTEDFGSSCSLLHYSSE
HTSSVTGLLTTSGIANSTFISSSLDATCKAWDVFSGRLIQTQDYPLGITAIVTDPAEQLL
FAGSMDGRIFVSVLDIGRLEDPLAVAGDEPVVLKGHNGSIMALTFSSVGLISASEDCTVC
LWDVVSQVIIRSFNHQKGAVTNLVVIPRSLLHSASNHRRVSNQFRVSVLSKCPQPANSSN
GILTLLHTCSSPKDHQASVDLRRTNSLNQQIFEMEQEQTPAAMQMKVETSIDHRTWARRM
TNHVMEMNRHLQSRLLDLMQTRLLLATENDSPTTRKSKKLKIESPPLQQQEKISQPPS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagggaaaaggaagtgatgaggttttggtggtgtgtagtgataggaatatgggg
acagggatagcaatgtgggatatggaaacaggagatcgtattatgcatataccaacttgt
gcttctcctcttcatggcttgttgtgtctgagagatcagtttcttgtagcttctcaggtt
aacaaacatgggtctgttggtggcggggctatcttcacttggtcattgaacaagcctcaa
caacctcttcgaagctacccgcttgaagccatcgggccacttggttgcaccaaggacggc
ctgtttcttgctggtggttctccgtctggaaatgtttacctctgggaggttgcaggtgga
agattactgaaaacctggcgtgcgcattccaggtgcttgaaatgcttgattttctctaat
gatgactcccttcttatttctggttcagaagatggtgtggtctgtgtgtggtctatggtt
agcttgctagatacagaagattttggaagctcatgttcattgttgcactactcttcggag
catacatcctccgtcaccggtctgttgacaacatcaggcattgcaaactcaacttttata
tcaagttctcttgatgctacatgcaaggcttgggacgtgttctcaggtaggcttatacaa
actcaggattatccactagggataactgcaatcgtcactgatccagcagagcagctcctg
ttcgctggaagcatggatggaagaatatttgttagcgtgcttgacattggacgcctggag
gatcctttagctgttgctggagatgaaccagttgtgctaaaaggacacaatggatctata
atggctttgaccttcagctcagtgggtctgatatctgcttctgaggattgcactgtctgt
ctctgggatgtcgttagccaggtgatcatacgaagctttaaccatcaaaaaggggcagta
accaatcttgtagtgattccacggtctttgctgcattctgcatcaaaccatcgaagagtt
tccaatcagttccgcgtttcagtgctcagtaagtgtcctcagccagccaactcatctaat
gggattctcactctccttcacacatgttcttcccccaaggatcatcaggcttctgtggat
ctcagaagaaccaattcattgaatcagcaaatatttgagatggagcaagaacagacacct
gcagccatgcaaatgaaggtagaaacaagcatagaccatcgtacatgggcaagaaggatg
acaaatcatgtcatggaaatgaacaggcatttgcaatctcgtctgctcgacttgatgcag
actcgattgttattagctactgaaaatgattcaccaactacaagaaagagcaagaagctg
aagatcgaaagtccaccactacaacaacaagagaagatatcacaaccccctagttaa
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