Populus euphratica (Euphrates poplar): 105125619
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Entry
105125619 CDS
T05872
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105125619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105125619
04121 Ubiquitin system [BR:
peu04121
]
105125619
03036 Chromosome and associated proteins [BR:
peu03036
]
105125619
03400 DNA repair and recombination proteins [BR:
peu03400
]
105125619
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105125619
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105125619
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105125619
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105125619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-HC5HC2H_2
zf-RING_2
zf-RING_UBOX
BRCT_2
zf-RING_6
zf-RING_5
RTT107_BRCT_5
zf-C3HC4_4
Prok-RING_4
zf-RING_10
PHD_NSD
DUF6567
zf-Nse
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
105125619
NCBI-ProteinID:
XP_011024447
UniProt:
A0AAJ6XMJ1
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MAGSVKQSVSSMNPWVLHLQKLGLELKCPLCLELLKRPLLLPCDHIFCNSCLTKTIQFGS
ECPLCEAQYGNSDLRCLPLIENMVTIYRSLDAAFSASILQSRSETGRVLKQCPASKSSDS
KDKKLVEAHWGNNSSSGQSKLMCNGVACAPSNCSVGKGVRKNVAMGNCNVPIHVKNKEYE
VIGSVGGTSNDKQNANSPPVGSQARARGLHESKAFQMDLNQADQLSPRSPPSFGDNKDSE
NDSNDQGGDDSLQNYKAENLVQLNSDNKRRQERHNTSASETEEGHLRDSKRHKKLNYSPS
DLGANDIGHIKPNASPTENLITSSQLEIPANLNNSFNACGFCHSSRITAHTGPMLHFANG
KPVEGVEATLSSTIHVHAVCIEWAPQVYFVGETVKNLKAELARGAKLKCSKCGLKGAALG
CYLKSCKRSYHAPCAMEITKCRWDYENFLVLCSAHSSVKFPSEKSKAKKHNPKTSSVLTS
VAPQQSNFWVGSCNGAKKWVFCGSALSSEEKCLLVKFGSMIGVPVSKFWASNVTHVIAAT
DSDGACTRTLKYLMAILNGKWVLTIDWIKACMESMHPVDEENYEIILDSHGSREGPKNGR
LSALNNAPKLFSCLSFCFVGDFVAGYKEGLQSLVIAAGGTLLKSEEELVEQRHDLLSPST
TLIVYNLDPPQGCKLEEEVSIIWQRINEAQDLAAKVGSQVIGHTWLLESISSYKLQPFVK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctcagtgaaacagagcgttagctctatgaacccatgggttcttcatctccag
aaattgggtctcgagctcaaatgccctctatgcttggaattgttgaagcgaccccttctg
ctaccttgtgatcacattttctgcaattcatgtttgaccaaaacgatacagtttggatcc
gagtgtcctctctgtgaagctcaatatggcaactcagatttgaggtgtttgcctttgatt
gaaaacatggtgacaatctatagaagcttggatgcagctttcagtgccagtattttgcag
tctcgttctgagactggtagggttttgaagcagtgtccggcttcgaagagtagtgatagt
aaggataagaaattagtggaagctcactgggggaataattctagtagcggacaatctaaa
ttaatgtgcaatggtgtagcttgtgctccatccaattgttcagttggaaaaggggttcga
aagaatgtagcgatgggtaattgcaatgtgccaattcatgttaaaaataaagagtatgaa
gtgattggtagtgtagggggtacgtctaatgataaacagaatgccaattctccaccggta
ggctcgcaggcaagagctagggggctccatgaatccaaggcttttcaaatggacttgaat
caggcagatcagttgtcgcctagaagtcctccttcatttggtgataataaggattcagaa
aacgacagtaatgatcagggaggtgatgatagtctacaaaattataaagcagaaaacttg
gttcaactaaattctgacaacaaaagaaggcaagagaggcacaacacttctgcttctgaa
accgaggaaggtcatttgagggattcaaagagacataagaagttgaactacagcccatcg
gatttgggtgcaaatgatattggtcatatcaaaccaaatgcatctccaactgaaaatttg
ataaccagttctcaattagagattcctgcaaatttgaataactcgtttaatgcttgtgga
ttctgccactcctccagaatcacagcacatactggtccaatgttgcattttgcgaatgga
aagccagtagagggagttgaagcaactctatccagcactatacatgtgcatgctgtgtgt
attgaatgggcaccgcaagtctattttgttggtgaaactgttaagaatctgaaggcagaa
ctggccaggggtgcaaagcttaagtgcagcaaatgtgggctgaagggagcagctttaggc
tgctatctaaaatcatgcaagagaagttatcatgctccttgtgcaatggaaattactaaa
tgtcgatgggattatgaaaacttccttgtgctttgctctgctcattcttcagtaaaattt
ccaagtgagaagtccaaggctaagaaacacaacccgaaaacttcttcagtgctgacttca
gtcgccccacagcagtctaacttttgggtgggatcatgtaatggagcaaagaaatgggtt
ttctgtggatctgctctgtcttctgaggaaaagtgtcttttggtgaagtttggaagcatg
attggtgtgccagtgagcaaattctgggcatccaatgtcacacatgtgattgcagccaca
gattcagatggggcatgcaccaggacgctgaaatatcttatggccattttgaatgggaaa
tgggttcttacaatagattggataaaggcttgcatggaatctatgcatcctgtggatgaa
gaaaattatgaaattattcttgacagccatggaagccgcgaaggcccaaaaaatggcagg
cttagtgcactaaataatgcaccgaaacttttcagctgcttaagtttctgttttgttgga
gattttgtggccggctacaaggaaggtctccagagtctggttattgcagcaggaggtaca
cttttgaagagtgaggaagaattggtggaacaaagacatgacctgttatctccttcaaca
acactaattgtttataaccttgatcccccacaagggtgcaaattagaagaggaagtttca
attatctggcagagaatcaatgaagcacaggatttagctgctaaagttggatcccaagtc
attggtcacacatggctgttggagtctatctcctcatacaagttacagccttttgtaaag
tga
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