Populus euphratica (Euphrates poplar): 105125677
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Entry
105125677 CDS
T05872
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105125677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105125677
03110 Chaperones and folding catalysts [BR:
peu03110
]
105125677
03029 Mitochondrial biogenesis [BR:
peu03029
]
105125677
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peu04147
]
105125677
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105125677
Messenger RNA biogenesis [BR:
peu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105125677
Chaperones and folding catalysts [BR:
peu03110
]
Heat shock proteins
HSP60 / Chaperonin
105125677
Mitochondrial biogenesis [BR:
peu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105125677
Exosome [BR:
peu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105125677
Exosomal proteins of other body fluids (saliva and urine)
105125677
Exosomal proteins of breast cancer cells
105125677
Exosomal proteins of colorectal cancer cells
105125677
Exosomal proteins of bladder cancer cells
105125677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
105125677
NCBI-ProteinID:
XP_011024539
UniProt:
A0AAJ6XMW2
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MYRFASGLASKASGVAGNNAKQIGSRLAWRRNYAAKDIKFGVEARALMLRGVEELADAVQ
VTMGPKGRNVVLEQSWGAPKVTKDGVTVAKSIEFQDRVKNIGASLVKQVANATNDVAGDG
TTCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVEAVVTSLKSRARMISTSEEIAQVG
TISANGEREIGELIAKAMEKVGKEGVITISDGKTMDNELEVVEGMKLDRGYISPYFITND
KNQKCELEDPLILIHEKKISSMSSTVKVLELALKRQRPLLIVAEDLEGEVLATLILNKLR
AGIKVCAIKAPGFGENRKASLQDLSILTGGQVITEELGLNLDNVGLEMLGSCKKVTVSKD
DTIILDGLGDKKTIEERCEQLRSAIGTSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAE
VGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLHTANFDQKIGVQIIQNALK
TPVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDA
ASVSSLMTTTEAIVSELPKVEKETPASNGMSGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcctctggcctcgcctccaaagccagtggggtggctggcaacaacgcc
aagcagattggtagtagattggcttggaggagaaattacgcggctaaagacatcaaattt
ggtgttgaagctcgtgctttgatgcttagaggtgttgaagagcttgctgatgctgttcaa
gttaccatggggcctaaaggacgtaatgtagttttggaacaaagctggggggctcctaaa
gtgacaaaagatggtgtaactgtagcaaagagcattgagttccaagacagagttaagaac
attggtgctagccttgtgaagcaggttgcaaatgctactaatgatgtggcaggcgatggc
accacatgtgcaactgtccttacccgtgcaatatttgctgaaggatgcaagtctgtggca
gctggaatgaatgccatggaccttagacgtgggatctcaatggcagttgaagctgttgtg
acaagcttgaagagcagagcaaggatgatcagcacatccgaggaaatagcccaggttggg
acaatatcagcaaatggagaaagagagattggtgaacttatagccaaggctatggagaaa
gttggcaaagagggtgtcatcacaatctctgatggaaaaacaatggataatgaattggag
gttgttgagggaatgaagctggacaggggctatatatccccttattttatcaccaatgac
aagaaccagaagtgtgaattagaagatcctctcattttaattcacgaaaagaagatctca
agcatgagttctactgtcaaagttttagaattggccttgaagaggcaaagacctttgctg
attgttgctgaagatttggagggtgaggtactcgcaactctcattttgaacaagcttcgt
gctggaatcaaggtttgtgccatcaaagcacctggatttggagaaaataggaaggccagt
ttgcaggatctttccattctcacagggggtcaggttataaccgaagagcttggcttgaac
cttgataatgtgggattggaaatgcttggctcatgtaaaaaggtgacggtatcaaaggat
gacactattattcttgatgggcttggtgacaagaaaaccattgaagaaagatgcgagcag
ttgagatctgccatcggaaccagcacctccgattatgataaagagaagttacaggagcgg
ctagcaaaactttctggtggtgttgcagttttaaagattggtggagccagcgaagctgaa
gttggtgagaagaaagacagggttactgatgctctgaatgccaccaaggctgctgtagag
gagggcattgtacctggtgggggtgttgcacttctttacgcctctaaggagcttgacaaa
ttgcatactgcaaattttgatcagaagatcggtgtccagattatccagaatgctctcaag
acacctgttcacactattgctagcaatgctggggtagagggagcagttgttgttggcaag
ctattggagcaggacaaccctgaccttggatacgatgcagccaaaggcgagtatgtagac
atggtgaaatcaggaattatcgatcctttgaaagtcattagaacagccttggtagatgct
gcaagtgtgtcttccttgatgactacaactgaggcaattgtgtctgaacttcccaaggtt
gaaaaggaaaccccagcaagcaatggcatgagcggcatgggattttga
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