Populus euphratica (Euphrates poplar): 105126953
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Entry
105126953 CDS
T05872
Name
(RefSeq) polyadenylate-binding protein 3
KO
K13126
polyadenylate-binding protein
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105126953
09123 Folding, sorting and degradation
03018 RNA degradation
105126953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105126953
03041 Spliceosome [BR:
peu03041
]
105126953
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105126953
mRNA cycle factors
Stress granule specific factors
105126953
Spliceosome [BR:
peu03041
]
Complex C
Other components
Complex C specific factors
105126953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_occluded
RRM_3
RRM_5
RRM_7
MARF1_RRM1
FliG_M
Motif
Other DBs
NCBI-GeneID:
105126953
NCBI-ProteinID:
XP_011026320
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MAAAVAVPVVTDQTAAVVAPAAETTAAEQFPNRSLYVGDLEHNVKEGQLFDLFSQVAPVV
STRVCRDQAGLTSLGYAYVNFSNPQDAAKAMEVLNFTPLNGKPIRIMFSHRDPTTRRSGH
ANVFIKNLDTKIDNKALHETFASFGPVLSCKVAVDNNGQSKGYGFIQFENEEDAQSAINR
LNGMLVNDREVYVGPFVRRLERIEANGSPKFTNVYVKNLSETTSDEDLKKIFSSYGAITS
AIVMKDQNGKSRGFGFVNFQSPDSAAAAVEKLNGMTFSDKVWYVGRAQRKGEREAELKAK
FEQERNSRYEKMKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMVDQQGLSKGSGFV
AFSTPEEASRALSEMNGKMIGKKPLYVAIAQRREERMARLQAHFSQIQAPGLPALPSGLP
GYHPGTPRLAPHQLYFGQGTPGMMPPQPAGYSFQPQLLPGMRAAVGPNFVMPYQLQRQGQ
QGQRIGMRPGGNHQQMQQQQLLHRNTNQGLRYVGNARNGIDSSVVPQGFVGPVMPLSFEA
SGMPVTPGHAQPTTPVPISTLTTALASATPENRMMMLGEQLYPLVECLEPDHAAKVTGML
LEMDQTEVLHLIESPDALKKKVAEAMQVLQEAGASSVGDQPGSLALNE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcggttgcggttccagtggttacggatcaaacggcggcagtggttgctcct
gcagcggaaacgactgcagccgaacagtttccgaacaggtcgctctacgttggggatctg
gagcataacgtcaaagaaggacaactgtttgatctctttagccaggtggcgccggttgtt
tccactagggtttgtagggatcaggctgggctaacctcgctcggctatgcttatgtcaat
ttcagcaatcctcaagatgctgcaaaagcaatggaggttctgaacttcacccctttgaat
gggaaacctatcagaattatgttttctcatcgtgatcctacaacaaggagaagtggacat
gcaaatgtctttatcaagaatctggacactaaaattgataacaaggctttgcacgaaaca
tttgcttcctttgggcctgtcctttcctgcaaagtagctgttgacaacaatggccaatca
aaaggttatggcttcatacagtttgaaaacgaggaagatgctcagagtgcaatcaaccgg
ttgaatggcatgttggtaaacgatagagaagtttatgttggaccttttgttcgacgtcta
gaaaggattgaggctaatgggtcaccaaaatttactaatgtttatgttaagaatttgtct
gagacaacttctgacgaggaccttaagaaaattttcagcagttatggtgccatcaccagt
gcaattgttatgaaggaccaaaatgggaaatccagaggttttggttttgtgaacttccag
agcccagattctgctgctgccgctgttgagaagttgaatgggatgaccttcagtgataag
gtttggtatgttggaagggcccaaaggaaaggagaaagggaggcagagttgaaagccaag
tttgaacaggaaagaaatagcaggtatgagaaaatgaaggctgctaatctctacctaaaa
aatcttggcgacaccattgacgaagaaagattgaaggaattattttctgagtttggatct
ataacatcatgcaaggtcatggttgatcaacaagggttgagtaagggctctggttttgtt
gccttttctacacctgaggaagcttcaagagctttgagtgaaatgaatggaaagatgata
ggaaagaaacccctgtatgtagccattgcccaacgcagagaagaaaggatggctcggctg
caggcacatttttctcaaattcaggcacctggactgccagctttaccgtcaggacttcct
ggatatcatcctggcacacctaggcttgcaccacaccagctctattttggccaaggaact
cctggcatgatgccccctcagcctgcaggctacagtttccagccgcaactcttgcctgga
atgcgtgctgctgttggccccaactttgtcatgccgtatcagctgcaaaggcaaggacaa
caggggcagaggataggtatgcggcctggagggaaccaccaacagatgcagcagcagcag
ctattgcaccggaatactaatcagggcttaagatacgtgggcaacgcaagaaatggcata
gattcatctgtggttccacaaggttttgttggtccagtgatgccattgtcctttgaggct
tcagggatgcctgtaactcctggtcatgcccagccaaccactccagtgcccatttcaact
ctcacaaccgctctggcttctgctacaccagagaaccgcatgatgatgctgggtgaacag
ctttatccccttgtggaatgtctggagccagatcatgcggcaaaggtgactgggatgtta
ttggagatggatcaaacagaggtgctacatcttattgaatctccagatgctctcaagaaa
aaggtggccgaggcaatgcaagtccttcaggaagctggtgcttctagcgttggtgatcaa
cctggctccttggcactcaatgaatga
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