Populus euphratica (Euphrates poplar): 105127408
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Entry
105127408 CDS
T05872
Name
(RefSeq) LOW QUALITY PROTEIN: transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105127408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peu04131
]
105127408
Membrane trafficking [BR:
peu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105127408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
Vps39_1
CNH
TPR_Vps41
EAD11
TPR_PEP5_VPS11
Motif
Other DBs
NCBI-GeneID:
105127408
NCBI-ProteinID:
XP_011026984
UniProt:
A0AAJ6XQ79
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MTILHVSLLKSVSFGDSPLDTVLLLDESGKVAVLCDGFLFLTDSGLVQPVKKLGFLKGVS
FITKRIKSSELECSDLFSASSLDGSSASSRILSRLGGGVRANGVKGKDSGLKSEGDYVFA
AVIGTKMILVELRVGKDDKEVDFAVLKEMQCIDGVKTIVWINDSIIVGTVNGYSLFSCVT
GQSGVIFTMPDGSSLALLKLLRKEKKALMLVDNVGIVVDAHGQPVGGSLVFRKGPDSVGE
LASYVVVVRDGKMELYHKKSGSRVQTVSFGSEGVGPCIVADEESGNGTLVAVATPTKVIC
YRRVPTEEQIKDLLRKKNFKEAISMVEELESNGEMSNEMLSFVHAQVGFLLLFDLHFEEA
VNHFLQSETTQPSEVFPFIMRDPNRWSLLVPRNRYWGLHPXPAPLEDVVDDGLMAIQRAI
FLKKAGVDTTVNENFLLNPPTRADLLELAIKNMSRYLEVSHEKELTSSVREGVDTLLLYL
YRALNRVNDMEKLASSGNSCLVEELETLLDESGHSRTLAFLYASKGMSSKALAIWCILAR
NYSSGLWKDPAMEHELPDGNTNIISGREIAATEASKILEELSDQDLVLQHLGWIADVNPV
LAVQVLTSEKRVNQLSPGSSCSPYLQWLIEDQDSCDAQFHTLYALSLAKSTVETFEVEST
FQDPDDGRLEETKISDFGRNSIFQSPVRERLQIFLQSSDLYDPEEVLDLIEESELWLEKA
ILYRKLGQETLVLQILALKLEDSEAAEQYCAEIGRPDTYMQLLDMYLDPQNGKEPMFNAA
VRLLHNHGESLDPLQVLETLSPDMPLQLASDTIVRMLRARLHHHCQGQIVHNLSRALHVD
AKLARLEERSRNVQINDESXCDSCHACLGIKLFAMYPDDTVVCYKCFCCLGESTSVTGCD
FKRDPLFKPGWLVNR
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgacaattctgcacgtttcgctgctaaaatcagtttcttttggtgactcgccgttagac
acggttctcttgcttgatgagagtggaaaggttgctgttctctgtgatggttttttgttt
ctgacggattcgggtttggttcaacccgttaagaaactggggtttttgaaaggggtttct
ttcatcactaagagaattaagagtagtgaattggagtgtagtgatttattcagtgctagc
agtttggacggttcaagtgcaagttctcgaattttgagcagattaggaggcggggttaga
gctaatggggttaaaggtaaagattctgggctaaaaagtgagggtgattatgtttttgct
gctgtgattgggacaaaaatgattttagtagagcttagagttggtaaggatgataaggag
gttgattttgcggttttgaaagaaatgcagtgtattgatggggttaagacaatagtgtgg
atcaatgattccataattgttggcacggttaatgggtatagtttgttttcgtgtgttaca
ggccaaagtggggtgatttttacaatgcctgacgggtctagtttggcattgcttaagtta
ttgcggaaagaaaagaaggcgttgatgttggtggataatgttgggattgtagttgatgcc
catgggcagccagttggagggagtttggtatttcgtaagggtccagattctgttggggag
ttggcttcttatgtagtggtagtgagggacgggaagatggagttgtatcataagaaatca
ggtagtcgtgtacagactgttagttttggcagtgaaggagttgggccatgtattgttgca
gacgaggaaagtgggaatgggacacttgttgctgttgcaacgcccaccaaggttatttgc
taccggagagtacctactgaagaacaaatcaaagatttactgagaaagaaaaattttaag
gaagcaatctccatggtggaggagcttgagagcaatggtgagatgtctaatgaaatgcta
tcctttgttcatgctcaagtggggttcctgctgctttttgacttgcattttgaggaagct
gttaatcactttctacaatccgagacaacgcaaccttctgaagtgtttccatttataatg
cgagatccaaatcgctggtcactgctggttcctaggaaccgatattggggtttgcacccc
naccctgctcctcttgaagatgttgttgatgatgggttgatggctatccaaagagctatt
ttccttaaaaaagcaggtgtggatactacagtcaatgaaaattttctcttgaatccacca
actagagctgatttacttgagttggcaataaaaaatatgagcagatatcttgaggtttct
catgaaaaagaattgacttcttcagtgagagagggagttgacacacttctgttgtacctc
tatagagccctcaaccgtgtcaatgatatggaaaagcttgcatcttctggaaacagctgt
cttgtggaggagttagaaactctgttagatgaatctgggcattcacggactcttgccttc
ttatatgcaagtaaagggatgagctcaaaggctcttgccatatggtgtattttggcaagg
aattattcttctggtctatggaaagatcctgctatggagcatgaattaccggatggcaat
acaaatattatctcaggcagagagatcgctgcaactgaggcatcaaaaattcttgaggag
ctgtctgatcaggatttggttttgcaacatcttggttggattgcagatgttaacccagta
ctcgcagttcaagttttgacatcagagaaaagagtaaatcagctttcaccaggtagctct
tgcagtccatatctccagtggttgatcgaagatcaagactcctgtgacgcacaattccac
acactgtatgcactctcacttgcaaagtcaacagttgaaacctttgaggtggaaagtacc
ttccaggatcctgatgatggaaggctagaggaaacaaaaatttctgattttggaagaaac
tcaatctttcaaagtcctgtgcgagaaaggttgcagatattcttacagtcatcagacttg
tatgatccggaagaggttcttgacttgattgaggaatcagagctatggctggaaaaggct
attctatacagaaaattagggcaagagactttggtgctacaaattttggccttgaagctg
gaggatagtgaagctgctgaacaatattgtgcagagattggcagaccagatacctatatg
cagttacttgatatgtatttggatccacaaaatggtaaagagcccatgtttaatgctgct
gttagacttctgcataatcatggagaatcattggatcctttgcaagttctagagacattg
tccccagacatgcccctccaacttgcctcggatacaatagtaagaatgttgagggctcga
cttcaccatcattgccaaggacaaattgtgcataatctgtcccgtgctctacatgttgat
gcaaaacttgcaagattggaggaaagatcacgaaatgttcagataaatgatgagagtnng
tgtgattcttgtcatgcctgtctaggaatcaaactgtttgcaatgtaccctgatgacact
gttgtctgttacaagtgtttctgttgtcttggagagtccacttctgtcacaggttgtgac
ttcaagcgagatcctttgttcaagccaggttggcttgttaaccgctga
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