Populus euphratica (Euphrates poplar): 105127578
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Entry
105127578 CDS
T05872
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105127578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105127578
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105127578
mRNA cycle factors
Common to processing body (P body) and stress granule
105127578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
105127578
NCBI-ProteinID:
XP_011027228
UniProt:
A0AAJ6UE79
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MTVPMDNPVDLSSRDRVQRLYDKNVELGNRLRRSAQARIPSDFTVWQQMRENYEAIILED
HVFSEQHEIEYALWQLHYRRIEEFRTHCKAALASNGSVTSQNGTMIARPERITKIRSQFK
TFLSEATGFYHDLMLKIRAKCGLPLVSFSDNLESQNIMSGEGSKATMMRKGLISCHRCLI
YLGDLSRYKGLYGEGDSKTSDFSAASSYYKQASSLWPSSGNPHHQLGILATYSGDEFEAI
YCYFRSLAVDNPFSTARDNLIIEFEKNRQSFSQLCGDAKASLTKNATRQIGRRGRGRGSK
MSPLKDNKKDASALKKNTSSIPETLKAFKIRFVRLNGILFTRTSLETFVEVLSMVKSDLL
ELLSSGPKEEYNFDSSSEDNGLVIVRLVSILIFTIHNVNREAKLESYADILQRSVLLQNA
FTAIFDLMGLIIKRCTQLNDPLASFLLPAVMIFLEWLACHPDFATGIEVEEHQAAARLFF
WENCIPFLNKLLSNGTMPIDVDGEDACFSNMSSYDESETSNRLALWEDFELRGFSPLAPA
QLILDFSRKQSVKSDVGVKEKKACLQRILYAGKALANLVRVGQQGMYFDSESKKFAIGAE
PQTAHSFEVAASLEMSSLNFLGHKYPAVEKLSVEQAPLYMDGEEEDEVIIFKPLMTDRHF
DANALELSAFEVPSNASQGNTESCIGSVPVSCDSYYLSNGFNRSTVGPKSPASVAALHFQ
ALQPHASKWPSRSEGSISNGLNNFNLVGNGLVMKSGLQEHQAVLQPSAVSLPLPLFVNPS
ACNLLPAKVSDTVVHSKSESVMSSVSGFDSLSLKASSVFSASSRLNPVSRPVHHLGPPPG
FSSVPPKAKCEILSGVGQENYDLHMDDYSWLDGYQPPSSAKATVFNNSINHPEQSCNHTK
ANDGLTGTRMFPFPGKQLQTFPMKIESQNGWLNCQLPDRLKVYQEWQQQQLAKIG
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgacggttccgatggataatccagtggatctttcatcgcgggaccgtgttcaacgtctt
tatgacaagaatgttgagttggggaataggcttcggaggtcagcccaagcaagaattcca
tctgattttactgtttggcaacagatgcgagagaattatgaggcaattatcctagaagat
catgttttctctgagcaacatgaaatagaatatgctttgtggcagttgcattaccggcgt
attgaggagtttcgaactcattgcaaagctgctctagcttcaaatggttcagttacatct
cagaatggaacaatgattgcaagacctgaacgaattactaaaatccgttcccagtttaaa
acctttctgtctgaagcaactggattctatcatgatttaatgttgaaaatcagagcaaag
tgtggtcttcctctagtttctttttcagataatttggagagtcagaatattatgtctgga
gaaggaagtaaagctactatgatgaggaaaggcctgatttcctgccaccgttgtctgatt
taccttggtgacctttcacgttataaaggcttatatggtgaaggagactcaaaaacaagt
gatttttcagccgcatcaagttactataagcaagcttcttcattgtggccttcaagtggc
aaccctcaccatcagcttggaatattagccacttattcaggggatgaatttgaagcaata
tactgctactttaggagtctagctgttgacaaccccttctcaactgccagagataacttg
attattgaatttgagaagaatcgtcaaagtttttcccagctctgtggggatgccaaagct
tcgttgacgaagaatgcaacaaggcaaattggtaggagaggaagaggcagaggtagcaaa
atgtctcccttgaaagacaataaaaaagatgcaagtgctctaaagaaaaacacatccagt
attcctgaaactttaaaagctttcaaaattcgatttgtccgactaaatggcatcctattt
acgcgaacaagtttggaaactttcgtagaggttctttcaatggtcaaaagtgacttgctt
gaacttctgtcatctgggccaaaagaagagtacaattttgattcaagttctgaggataat
gggcttgtgattgttaggcttgtatccattcttatattcacaatccataatgtgaatagg
gaagctaagcttgagtcatatgctgacatattgcaacgctctgttttgcttcagaatgct
tttactgccatctttgacttgatggggctcattattaagagatgcacacaactgaatgat
cctttggctagctttctgttgcctgcagtgatgatttttttggagtggttagcctgtcat
ccagattttgctactggcatcgaagtggaagagcatcaagctgctgctagattgttcttt
tgggagaattgtattccttttttgaacaagcttttgtcaaatgggaccatgcccattgat
gtggacggagaggatgcttgtttttccaacatgagcagctatgatgaaagtgaaacctcc
aacaggcttgcattgtgggaggacttcgaattgagagggttttcgcctcttgctccagca
caattgattcttgatttttcaaggaagcaatctgtcaaaagtgatgttggtgtcaaggag
aaaaaggcatgtcttcagaggattctatatgctggaaaagctcttgcaaacctagttcgg
gttgggcagcaaggcatgtattttgactcagagtcgaagaaatttgccattggtgctgag
cctcaaacagcccatagttttgaggtggctgcttctcttgaaatgtcttctttaaatttt
ttggggcacaaatatccagctgtggagaaattgagtgtggaacaggctcctctatacatg
gatggggaagaagaggatgaggtgattatttttaagccgttgatgactgataggcacttt
gatgccaatgctcttgagttgtctgcttttgaggttccaagtaatgcctctcaaggcaac
acggagagctgtataggatctgttcccgtctcatgtgattcttattatctgtcaaatggt
ttcaatagaagcacagttggccctaaatctcctgcatctgttgccgccctgcattttcaa
gcattgcaacctcacgcttcaaaatggccttccagatctgaaggatccatttccaatggg
ctgaacaacttcaatttggtagggaatgggcttgttatgaagagtgggttgcaagaacac
caagcagttttgcagccttctgcagtttcacttcctcttccgctctttgtgaaccctagt
gcttgtaacctgctaccagctaaggtttctgatactgtagtacactcgaaatctgagtca
gtcatgtcttctgtctctggttttgacagtctgtccttgaaggcatcatcagtgttctca
gctagttcaagattgaatccagtaagccgtcctgttcatcaccttggccctccacctgga
tttagctctgttcctcctaaggccaaatgtgagatcttatcaggcgttggtcaggagaat
tatgatttgcatatggatgattatagctggcttgatggatatcagccaccatcatcagca
aaagcaactgtgtttaacaattctatcaatcaccctgaacaatcttgtaatcatacgaaa
gcgaatgatggcctgacaggaacaagaatgtttccatttcctggcaagcagctccaaaca
tttccgatgaaaattgaaagccagaatggctggttgaactgccagcttcctgatcgtctg
aaagtgtaccaggagtggcaacagcagcaacttgcaaaaataggctag
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