KEGG   Populus euphratica (Euphrates poplar): 105127651
Entry
105127651         CDS       T05872                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein isoform X1
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105127651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:peu03041]
    105127651
Spliceosome [BR:peu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    105127651
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_Aladin NBCH_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C PRP4 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR41 WD_LRWD1 eIF2A Beta-prop_SCAP PROPPIN Beta-prop_Nup120_160 Beta-prop_WDR75_2nd WD40_like Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 105127651
NCBI-ProteinID: XP_011027326
UniProt: A0AAJ6XQJ3
LinkDB
Position
Unknown
AA seq 585 aa
MPQRERKEIVVMAAEEENPALSNLPEESSAVVPDDELMIDKSSHIQPTPPIIPPVIPSSI
PVLPSIAPIPIVPPRPLAPLPIRPPATRPPGVQNGEMRTSDSDSDQEELSPTGTTPGSTG
GYEISEASRLVRERQQKAMQEFMMKKRAAALAVPTNDMAVRTRLRRLGEPITLFGEREME
RRDRLRMLMAKLDSEGQLEKLMKVHEEEEAASSAAAEDAEEEFVQYPFYTEGSKDLLDAR
IDIAKYSISKAALRLQRARRKRDDPDEDEDAEIDWTLNQAESLGLNCSELGDDRPLSGCS
FSCDGEMLATCSLSGVAKIWSVPQVTKVSNLKGHMERATDVAFSPVHNHLATASADRTAR
LWNTDGSLLMKFEGHLDRLARVAFHPSGKYLGTTSFDKTWRLWDIDSGVELLLQEGHSRS
IYGIAFHHDGSLAASCGLDALARVWDLRTGRSIMALEGHVKPLLGISFSPNGYHLATGGE
DNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYYLVTSSYDMTAKVWSGRDFKHVKT
LSAHEAKVTSLDISADGRLIATVSHDRTIKLWSSRSNEKDAMEVE
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgccccaacgagaaagaaaagaaatagttgtcatggcagctgaagaggaaaatcccgct
ttgtcaaatttaccagaagaatcttctgctgtagtccctgatgatgaactaatgattgat
aaatctagtcatattcaaccaactccaccaatcattccgcctgtaatcccatcttcaata
ccagttttgccttctattgctccaatacctatagttcctccccgcccattagcaccactc
cccatccgaccgcctgcaactaggccacctggagtgcaaaacggcgagatgagaactagt
gactcagattctgaccaagaggaattaagtcccactgggactacccccgggtcaactggg
ggttatgaaatttcggaagccagcagactagtgagagaacggcagcaaaaggcaatgcag
gagtttatgatgaagaagcgtgctgctgctttggcagtgcctactaatgatatggcagtt
aggactcgtcttcgccggcttggtgagcctataactcttttcggagaacgagagatggag
agacgggacaggttgaggatgcttatggctaagttggattctgaaggacaactggagaag
ttgatgaaagttcatgaggaagaggaggctgcatcaagtgcagcagcagaagatgccgag
gaagaatttgttcagtatccattctacactgaagggtcgaaagacctcttggatgctaga
attgatattgctaaatactccatttcgaaggcagctttgcgtcttcaacgtgcaaggaga
aaaagagatgacccagatgaagatgaagatgcagagattgattggactctgaatcaggcg
gagagtttgggtcttaattgcagcgagcttggagatgaccggccactctctggctgttcc
ttctcttgtgacggagaaatgctcgctacctgttccttaagtggagttgctaaaatatgg
agcgtgcctcaagttacaaaggtttctaacttaaagggacacatggaacgtgcaactgat
gtcgccttctctcctgtgcacaatcatttggcaactgcctccgctgatcgaactgcaagg
ttgtggaacactgatggttctctcctgatgaagtttgaaggtcatctagaccgtcttgct
cgcgttgctttccatccatcagggaagtacttgggcaccacgagctttgataagacgtgg
agactgtgggatatagattctggtgtggagctgctccttcaagaaggtcacagtcggagc
atttatggaatagctttccatcatgatggatcattagcagcatcctgtggattggatgca
ctagcacgtgtttgggacctacgtactgggagaagtataatggcattggaaggccatgtc
aagccgcttcttgggatcagcttttctcctaatggctatcatttagcgactggcggagag
gataatacttgccggatatgggatttaaggaagaaaaaatcattgtatgtcataccagca
cactcaaatcttgtatcacaagtaaagtttgagccccaagaaggctattatctggttaca
tcatcatatgacatgactgctaaggtttggtctggccgagattttaagcatgtcaagaca
ttatcagctcacgaagccaaagttacatctctggatattagtgcagatggacgtctaatt
gcaactgtctcacatgatcgaaccatcaagctgtggtccagcagaagcaatgaaaaggat
gctatggaggttgaatga

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