Populus euphratica (Euphrates poplar): 105127719
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Entry
105127719 CDS
T05872
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105127719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105127719
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105127719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_6
LRR_At5g56370
LRR_EndoS
LRR_Zer-1
LRR_8
LRR_R13L1-DRL21
F-box-like
LRR_At1g61320_AtMIF1
F-box
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
105127719
NCBI-ProteinID:
XP_011027403
UniProt:
A0AAJ6UCW9
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MSGEAKGRREDLNLFSEKPMMLAFDGGKRGIGAGGGEIEGLVITEWKDIRMELLLRLVSL
VDDRTLIIASGVCSGWRDAICSGRTHLCLSWCKNNMNNLVLSLAPKFTKLQTLVLRQDKP
QLEDNAVETIANYCHDLQDLDLSKSFKLSDLSLYALAHGFPNLTKLNISGCTAFSDVSLE
YLTEFCRKLKILNLCGCVNGATDRALQAIGRNCSQLQSLNLGWCENVSDVGVMSLANGCP
DLRTLDLCGCVCITDDSVIALANRCPRLRSLCLYYCRNITDRAMYSLVHNRVKNKPAMWE
SLKGRYDEEGLKSLNISQCTAITPLAVQALCDSFPALHTCSGRHSLVMSGCSNLTSVHCA
CAVQAHQTASSITYSAH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggaagcaaaagggagaagggaagacttgaacttgttttctgagaagccgatg
atgcttgcttttgatggtggaaagagggggattggtgcaggaggtggggaaatcgaaggc
ttggtgatcactgagtggaaagatatccgtatggagctgttgttaaggcttgtttctctt
gttgatgataggaccttgattatcgcttccggggtttgcagtggatggagggatgctatt
tgctcgggacgcacccatctgtgtctctcttggtgcaaaaacaacatgaacaacttggtt
ctatctcttgctcctaaatttacaaaactgcaaactcttgtgctgcgccaagataaacca
caacttgaggataatgctgttgagactattgcaaattactgtcatgatctgcaggacctg
gatctcagcaaaagctttaagcttagtgatctctccttgtatgcattagctcacggtttt
cccaatctcaccaaactcaacatcagtggttgtacggcattcagtgatgtttctctagag
tatctgacagaattttgccgaaaattaaaaattttaaatctctgtggatgtgtgaatggt
gcaactgaccgtgccttgcaggctattggacgcaactgcagtcagttgcagtctttgaat
ctgggatggtgtgagaatgtgagtgatgtcggagtaatgagtctagcaaacggatgtcct
gatctcaggacccttgacttgtgtggttgtgtctgtataacagatgatagcgtgattgct
ttggcaaacaggtgtccccgtcttagatccctctgtctgtactactgccggaacatcaca
gatagagcaatgtattcccttgtccacaaccgggtgaagaacaagcctgcaatgtgggaa
tcgctgaaaggcaggtatgatgaggaagggttaaagagtctcaacatcagtcagtgcacg
gcaatcacacctcttgctgttcaggctctatgtgactcgttccctgcacttcatacctgc
tcagggaggcattccctcgttatgagtggctgctcgaacttaacttccgtgcattgtgcc
tgtgctgtccaagcccaccagaccgcaagttcgattacttattcggcacattga
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