KEGG   Populus euphratica (Euphrates poplar): 105127776
Entry
105127776         CDS       T05872                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03030  DNA replication
peu03410  Base excision repair
peu03420  Nucleotide excision repair
peu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105127776
   03410 Base excision repair
    105127776
   03420 Nucleotide excision repair
    105127776
   03430 Mismatch repair
    105127776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:peu03032]
    105127776
   03036 Chromosome and associated proteins [BR:peu03036]
    105127776
   03400 DNA repair and recombination proteins [BR:peu03400]
    105127776
DNA replication proteins [BR:peu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105127776
  DNA Replication Termination Factors
   ELG1-RFC complex
    105127776
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105127776
DNA repair and recombination proteins [BR:peu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105127776
  Check point factors
   HRAD17(Rad24)-RFC complex
    105127776
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_16 AAA_22 AAA_11 ATPase_2 AAA_5 AAA_14 AAA_assoc_2 AAA_24 AAA_30 DUF815 AAA_7 AAA_19 RuvB_N bpMoxR ResIII AAA_3 nSTAND3 DNAX_ATPase_lid SLFN-g3_helicase TniB AAA_2 AAA_28 AAA_25 ABC_tran Mg_chelatase UBA_Rad5 TIP49
Other DBs
NCBI-GeneID: 105127776
NCBI-ProteinID: XP_011027494
UniProt: A0AAJ6XQP5
LinkDB
Position
Unknown
AA seq 363 aa
MAEAIALMDIDEEENQNHLSKPNKGKNVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI
IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV
RKQIQDFASTQSFSFGAKTSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN
ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFVESYKRISEIKTRKGLALV
DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVA
AAN
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggcggaggcgatcgcactcatggacattgacgaagaggagaaccagaaccacttatcg
aaaccaaacaaaggcaaaaacgtcgtcgtacccgccacaccacccggcggtaaagctact
ccctgggttgagaagtaccgtcctcaatcactagccgatgtcgccgctcaccgtgacatt
atcgataccattgataggctgaccagtgaaaacagattgccgcatctcttgttatatggc
cctcctggcacgggcaaaacgtcaacaattcttgctgtggcgcgtaaactttacggagcg
cagtaccacaatatgattttggagttgaatgcatcagatgatagaggaattgacgttgtg
cggaagcaaatacaagatttcgctagcactcagagcttctcttttggcgcaaagacatct
gtaaagttggttttacttgacgaggcagatgcaatgacaaaggatgctcaatttgccttg
cgtagagtgattgagaaatatacgaagaacaccaggtttgcacttatctgcaatcatgtg
aacaagattatcccagcactacagtctcgatgtactcgatttcgatttgctcctcttgat
ccaatgcatgttggtgaacgacttaaacatgtcatagaggctgaagggcttgatgtacca
gagagtggcctagaggcgcttaaatgtcttagcaatggtgacatgagaaaggctttgaat
atactgcagtcgactcacatggcttctcaacaaattacagaagaaactgtatacctgtgc
actggaaacccattgccccaagatgtgcagcaaataacccactggcttctgaatgaatct
tttgtagagagctataaacgaatttctgaaattaagacaaggaaaggtttggccttggtt
gatattgtaagagaagtgaccatgtttgttttcaagattaagatgcaatcagatatccga
gtgccattgatcaatgatttggctgatatagaatacaggttgagctttgggtgcaatgat
aagctgcaacttggatcacttattgcttcttttactagggctcgatctgcattggttgca
gccgcaaattag

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