Populus euphratica (Euphrates poplar): 105128149
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Entry
105128149 CDS
T05872
Name
(RefSeq) cleavage stimulation factor subunit 77
KO
K14408
cleavage stimulation factor subunit 3
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105128149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105128149
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105128149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_15
TPR_16
TPR_2
TPR_CcmH_CycH
NRDE-2
Motif
Other DBs
NCBI-GeneID:
105128149
NCBI-ProteinID:
XP_011027985
UniProt:
A0AAJ6UEL9
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MASVDSGAQSETKDQAATSTTAATDPYNVEAAEILASSAQHMPIAQAAPIYEQILSLFPT
ASKFWKQYAEAHMAVNNDDAVKQIFSRCLLNCLHVPLWRCYIRFIRKVNEKKGADGQDEI
RKAFDFMLGYVGADMASGPVWMEYITFLKSLPAQNAQEESIRMTAIRKTYQKAIITPTHH
VEQLWREYEHFENSVSRQLAKGLLSEYQPKYNSARAVYREQKKYVDEIDYNMLAVPPTGS
FKEEQQWMAWKRFLTFEKGNPQRIDSVSSNKRIIFSYEQCLMYLYHYQDIWYDYATWHAK
SGSIDSAIKVFQRALKALPDSDTLKYAYAELEESRGAIQPARKIYESLLGDGVNATALAH
IQFIRFLRRNEGVEAARKYFLDARKSPDCSYHVYVAYALIAFCLDKDSKIAHNIFEAGLK
HFMHEPVYILEYADFLSRLNDERNIRALFERALSSLPPEESVEVWKRYIQFEQTYGDLAS
LLKVEQRRKEALSRTVEDGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQEWLAKNI
NKKAEKSAVSNGPANLDKIPAGLASNSNASGKVIYQDTSQMVIYDPRQKLEAGIPPSTTV
SGFKAASNPLSNSIGLAPNVFDEVLKATPPALISFLANLPIVEGPAPNVDIVLSICLQSD
VPVGKTGKSGTTQTPMLSGPATSDLSGSSRSRPVPSGSSFKTRDRQSGKRKDRDRQEEDE
TATVQSQPLPRDVFRIRLIQKSRAATTSQTGSVSYGSALSGDLSGSTT
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtcgatagtggagctcaatctgaaacaaaggatcaagcagcaacaagtact
actgccgcgactgatccatacaatgtcgaagctgcagaaatattagctagcagcgcacag
catatgcctattgcccaagctgctccgatatatgagcaaatcctttcactgtttcccact
gcttcaaaattttggaaacaatatgcggaggcacatatggctgtgaataatgatgatgct
gtaaaacagatatttagccggtgtttattgaattgtcttcatgttcctctttggcgatgc
tacattcgattcatcagaaaggtcaatgagaagaagggtgcagacggccaggatgaaata
agaaaagcttttgacttcatgcttggttatgttggggcagacatggcatctgggcccgta
tggatggaatacattacctttctgaagtcactaccagctcaaaatgcacaggaagagtca
atacggatgaccgctatacgtaaaacataccagaaagctattatcacacctacccatcat
gttgaacaactctggagagaatatgaacattttgaaaattctgtcagccggcaattggcc
aaaggactcttatctgaatatcaaccaaaatataacagtgccagggctgtctatagggag
cagaagaaatatgttgatgaaattgattataatatgctagctgtaccaccaactggatct
ttcaaggaagaacaacaatggatggcttggaagagatttttgacgtttgagaaaggaaac
ccccaaaggatagacagcgtgtcctccaacaaacgaattatattctcctatgagcagtgt
ctgatgtatttgtatcattatcaagatatatggtatgactatgctacctggcatgcaaaa
agtggctctatagattctgcaatcaaagtgtttcagagggctttgaaggctcttccagat
tcagatacgctgaagtatgcttatgctgagttggaggaatctcgtggagcaatccagcct
gcaaggaaaatctacgaaagcctcttgggagatggtgttaatgcaacagcactagctcat
atacagtttattcgctttctaagaaggaatgaaggagtggaagcagctcgcaagtacttc
ttagatgctcggaaatccccagactgctcttatcatgtttatgttgcttatgctttgata
gcattttgtctggacaaggattcaaagatcgcacacaatatttttgaagcaggattgaaa
cacttcatgcatgaaccagtgtacattctggaatatgcagatttcttgtcccgtttgaat
gatgagagaaacattcgagctttatttgagcgtgcattaagctcgctaccacccgaggaa
tctgttgaggtctggaaacgatatatccagtttgagcaaacatatggtgatcttgctagc
ttgttgaaggtcgagcaaagaagaaaagaagctctttcgaggacagttgaagatggagca
tcagcattagagagttcattgcaggatgttgtgtcacggtatagtttcatggatctttgg
ccatgctcctctaaggatttggatcacttagctcggcaagagtggctagctaaaaatatt
aataagaaagcagagaagtctgctgtttctaatggacctgcaaatttagataagattcct
gctggtctggcaagtaattcaaatgcatctggtaaagtaatttatcaagatacctcgcaa
atggtaatttatgacccaaggcaaaagctagaggctggaattccacctagcacaacagtg
tctgggttcaaggctgcttctaacccattgtcgaattctattggattggcacccaatgta
tttgatgaggtgctgaaagcaacaccacctgcattgatatcttttttagcaaacttgccc
atagttgaaggtcctgcaccaaatgtagatattgtattatcaatttgtttgcagagtgac
gtacctgttgggaaaacaggaaaatcagggacaacccaaactccaatgctttctggtcct
gcaacaagtgatctttctggttcaagcagatcacgtcctgtcccgagcggttcatctttc
aaaacacgggatagacaatctgggaaacggaaggaccgagacaggcaagaagaagatgaa
acggctaccgtccaaagccaaccattacctagagatgttttcaggatacggctgattcaa
aaatcgcgagctgctaccacttcacagacagggtcagtatcatacggaagtgctctttca
ggagatctgtctggtagtaccacctga
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