Populus euphratica (Euphrates poplar): 105128185
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Entry
105128185 CDS
T05872
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E-like
KO
K07466
replication factor A1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03030
DNA replication
peu03420
Nucleotide excision repair
peu03430
Mismatch repair
peu03440
Homologous recombination
peu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105128185
03420 Nucleotide excision repair
105128185
03430 Mismatch repair
105128185
03440 Homologous recombination
105128185
03460 Fanconi anemia pathway
105128185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
peu03000
]
105128185
03032 DNA replication proteins [BR:
peu03032
]
105128185
03400 DNA repair and recombination proteins [BR:
peu03400
]
105128185
Transcription factors [BR:
peu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105128185
DNA replication proteins [BR:
peu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105128185
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105128185
MMR (mismatch excision repair)
105128185
DSBR (double strand breaks repair)
HR (homologous recombination)
105128185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
CDC24_OB3
DUF223
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
105128185
NCBI-ProteinID:
XP_011028038
UniProt:
A0AAJ6UDS9
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MNLTEGAISKITSGGATSAELKPTLQVTDLKQVQTKQPQQSDRFRLVLSDGSHLQQAMLG
TQINHLVKDGNLRIGSIVQLNQYTCTTVQGRMIIIILELALVAEECELIGNPVAAQRSSG
PSPSPVAQPGNVNASPKSFGTNSATGGVVGNQNMSAAPVQSPEINQFNNTPPSSNYGPGR
FAPTNAPPLYPKVEATAGSVPSSGLYVNQNAGYLNPRPEISQPHMGSYSRPPQSAYQQPP
PMYSNRGPVARNEAPPRIIPITALNPYQGRWTIKARVTAKGELRHYNNARGDGKVFSFDL
LDSDGGEIRVTCFNQVADQFYHQIEAGRVYLISKGNLKPAQKNFNHLRHDLEIFLESTST
IQPCFEDDNTIPKQQFHFRPISDVEDMENNSVVDVIGVVTSITPTTSLMRKNGTETQKRT
LQLKDMSGRSVELTLWGNFCNAEGQRLQHICDSGGFPVLAVKSGRISEFSGKAVGTISTS
QLFIEPDSPEANRLKEWFDREGRNTPSLSISRETSTLGRSDVIKTISQIKDERLGTSEKP
DWITVPATVIYVKSDNFCYTACPIMSGERPCNKKVTNNGDGKWRCEKCDQSVDECDYRYI
LQIQIQDHTGITWVTAFQECGEEIMGISAKDLHYLKHEQQDDEGFSKVLRQVLFSRYVFK
LKVKEETFSDEQRVKSTVVKSEKVNYSSQSRLLLGMMEKFRSGNDSSFACKAESSYHNPG
VNNAGIGNFGSRQAGPPGSNPVGSTSYAGNVGLPANQLGQYGNQQSPMFPMQSSSGAYLS
CNSCGATSHSSANCPSMVNAPRQSMGGSYANRTSQGGTGECYKCHQVGHWARDCPGLSSS
GKMGGISKQHVGGF
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaaggagcaatatccaagataacaagcggaggagctacctcggccgaa
ctgaagccgacgctgcaagtgacagatttgaagcaggtgcagacgaagcaaccgcaacag
agtgatcggtttcggttggttttatctgatgggtctcatttgcaacaagctatgcttggg
actcaaattaatcatttggttaaagacgggaacttgcggattggttctattgttcagttg
aatcagtatacttgtactaccgttcaaggccgcatgattattattattctcgaattggcc
ctggtagctgaagaatgtgagttgattggaaatcctgtagcagctcaaagatcttcaggg
ccttcaccatcaccggttgctcaaccaggaaacgtcaatgcaagtcctaagtcatttggt
accaactcagctactggtggtgtggttgggaatcaaaatatgtctgcagctcctgtacaa
agccctgagataaatcagtttaataatacacccccttctagcaattatggcccaggaagg
tttgctccaacaaatgctccaccactttatccgaaagtagaagctactgctggatcagtt
ccatcaagcgggttgtatgttaatcagaatgcaggttaccttaaccctagaccagaaatt
tcacagcctcatatgggaagttattcccgccccccacagtcagcatatcagcaaccgcct
ccaatgtacagtaacagaggaccagttgctaggaatgaggctccgccaaggatcattcca
ataacagcattgaatccataccagggtaggtggactattaaggctagggtgactgcaaaa
ggggagctcaggcattataataatgctcgtggtgatggtaaagttttctccttcgatctt
cttgattctgatggcggagagatcagagtgacctgctttaaccaagtggctgaccaattc
taccaccagattgaagctggcagggtttatttgatttccaagggaaatttaaaacctgct
caaaagaatttcaaccaccttcgtcatgatctagaaattttcctggagagcacttcaacc
atacagccatgctttgaggatgacaacacaattccaaagcagcaatttcatttccgtccc
attagtgatgttgaagacatggagaacaatagtgttgtggatgtaattggggtggtaaca
tccattactcccactacttcattaatgagaaaaaatgggacagaaactcagaagagaacc
ctccagttgaaggatatgtctggtcgaagtgttgaattaaccctctggggaaatttctgc
aatgctgagggtcaaaggctacaacacatctgtgattcagggggtttccctgttcttgcc
gtcaaatcaggtagaatcagtgaatttagtgggaaggcagttgggaccatatctacaagt
cagctatttatagaaccagattctccagaggctaacaggctaaaggaatggtttgacaga
gaagggaggaacactccttctctttcaatttctagggaaacttcaactttgggtaggtca
gatgtcatcaagactatttctcaaataaaggatgagaggctaggaacatctgagaagcct
gattggatcactgtccctgcgactgttatatatgttaagtctgacaatttctgctataca
gcttgccccatcatgtcaggggaacggccatgcaataaaaaagtcaccaataatggagat
gggaagtggcggtgtgaaaagtgtgatcaatctgtggatgaatgtgactacagatatata
ctccagattcagatacaggaccatactggcataacatgggtgactgcattccaggaatgt
ggtgaggagataatgggtatatctgcaaaagatttgcattatttgaagcatgaacagcaa
gatgatgagggattttcaaaagtacttcgccaggttctgtttagtagatatgtattcaag
ttaaaagtaaaggaggaaactttcagtgatgaacagcgtgtaaagtctactgttgtcaaa
tcagaaaaggtgaattattcatctcagtccaggcttcttctgggtatgatggagaagttt
agatcagggaatgatagttcttttgcctgcaaagcagaatcaagttaccataaccctggt
gtgaataatgctggaattggaaattttggaagcagacaagctggacctccaggatcaaac
cctgtggggagcaccagctatgccggtaatgttgggttaccagcaaatcaattgggccag
tatggaaaccagcaaagccctatgttccccatgcaaagttcttccggtgcttatctaagc
tgcaacagctgtggggccaccagtcatagctcggcaaattgcccgagtatggtgaatgct
ccgcggcagtctatgggagggagctatgccaatagaacatctcaggggggcactggtgaa
tgctataaatgccatcaagttgggcactgggcaagagactgccctgggttaagcagctct
ggcaaaatgggaggtatttcaaagcaacatgtgggtggtttctga
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integrated database retrieval system
