Populus euphratica (Euphrates poplar): 105128894
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Entry
105128894 CDS
T05872
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105128894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105128894
03036 Chromosome and associated proteins [BR:
peu03036
]
105128894
Enzymes [BR:
peu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105128894
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105128894
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
105128894
Noncanonical PRC1 (PRC1.1)
105128894
Noncanonical PRC1 (PRC1.3/1.5)
105128894
Noncanonical PRC1 (PRC1.6)
105128894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
DUF7044
zf-UDP
zf-rbx1
zf-Nse
zf-RING_6
zf-RING_11
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
105128894
NCBI-ProteinID:
XP_011029043
UniProt:
A0AAJ6UFQ1
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MPADNTPPSSPHNINPHNEEQQHQQQQQQDLSELSPPRQNGHPTDQEPHHLQNGQHQEEV
EEGEEEVDIKELEVQKEEEGVEGGGRGDEEEGKEESDGTQSFSSSSSSSSCEDEEKPEFV
FVELPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCASRR
SLRDDPNYDALIAALYPDIDKYEEEELAFHEEEMTRNKQIQASIAQIIQRQSEALVKRRT
MSKESTFTTRTRRPIVRRRRNSRSSDFQGSEDIEDENDDNIGKDSSSADERSTEVRHRRP
KRRWPSQPSSSAVNSEGGGAEHDLDSNRENRGLSPGLAWNTEMLAWGRGGTRSHTRHGNP
SGCNNKNSRNTRLSKLVEYLRSLDEKNDELDIHLKLITLGNQSTPSLQQPYLCCRPSLSV
KHLCEYVAHQTTLQAEEVELLLIKGKAENLSAKHSQIPMDELQILKGQETVAGLKASCSS
SRDHLILAYRQKEIIKS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgacaacacccctccttcttcaccacacaacattaatccccacaatgaagaa
caacaacatcagcagcagcaacaacaagacttgtccgagctgtctcctcctcgacaaaac
ggtcatccaactgaccaagaaccacaccaccttcaaaacggccagcatcaagaagaagtg
gaagagggggaggaagaagtagacatcaaagaactagaggttcaaaaagaagaagaggga
gtggaaggaggaggacgaggggatgaggaagaagggaaagaagaatctgatggaacccag
tctttttcttcgtcatcttcttcttccagttgtgaagatgaggaaaagcctgaatttgtc
ttcgtggaacttccggacattcggaaagatgtgcaatgtcccatatgtttagggatcata
aagaaaacaagaactgtaatggaatgcctgcaccgtttttgcagggaatgtattgataaa
tcaatgcgaatggggaacaatgagtgccctgcttgccgcacacattgtgcaagtcggcgg
tccttgagagatgatccaaattatgatgccctaattgcagctttatatccagacattgat
aagtatgaggaggaggaattggcttttcacgaagaggaaatgactcggaacaaacagatt
caagcttcaattgcccaaataattcaaagacagtcagaagcactagttaagagacgcacg
atgagtaaagagtcaactttcacaacacgaacacgtcggcctattgtaaggaggcgacgg
aacagtcggagcagtgattttcaaggatctgaagacattgaggatgaaaatgatgacaat
ataggcaaggattcatcttctgctgatgagcgctccactgaagttaggcataggaggcct
aagagacggtggccctcccagccttcttcttcagcagtcaattcagagggtggaggtgct
gaacatgatttagattcaaacagagaaaacaggggattatctcctgggcttgcgtggaac
acagaaatgcttgcttggggcaggggcggtactcggagtcatacaagacatggtaatcct
agtggttgcaacaataagaattcacgaaatactcgcttatccaagctggtagaatatctc
agaagcttagatgagaaaaatgacgagttggatatccatctcaagcttattaccttgggc
aatcaaagtacaccaagcttgcagcagccctacctttgttgccggcccagtttgtcagtt
aaacacttatgtgaatatgttgctcaccagacgactttgcaagctgaggaagtggaactc
ttgttaattaaggggaaggctgaaaatttgtcagccaagcattctcagatccctatggat
gagctgcaaattttgaaaggacaagaaacagttgcaggtcttaaagcaagttgctcttcc
agtagagatcatttgatactagcatatcggcagaaggagatcatcaaaagttga
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integrated database retrieval system
