Populus euphratica (Euphrates poplar): 105129084
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Entry
105129084 CDS
T05872
Name
(RefSeq) DNA repair helicase XPB1-like isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03022
Basal transcription factors
peu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105129084
09124 Replication and repair
03420 Nucleotide excision repair
105129084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105129084
03400 DNA repair and recombination proteins [BR:
peu03400
]
105129084
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105129084
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105129084
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105129084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
ATPase_2
Motif
Other DBs
NCBI-GeneID:
105129084
NCBI-ProteinID:
XP_011029322
UniProt:
A0AAJ6XS64
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MGHGDKSGRPNKKFKFTSKDDYRSSVADDDVFYPEEAGDDFRDGGTEGKKRDFSKLELKP
DHANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV
GLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLL
KDEVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPS
QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRA
RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSLWSDISQDQICRFT
SDSKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFR
KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC
PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEEQRRDKIIVFADNLFALTE
YAMKLHKPMIYGATSHAERTKILHAFKTSSEVNTVFLSKVGDNSIDIPEANVIIQISSHA
GSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG
YSFKVITSLPPADSGADLSYHSLEDQLGLLAKVLSAGDDAVGLEQLDEDADDIALHKTRR
YMGSMSAMSGANGMVYMEYSTGQKGGKGQIKGKPKDPSKRHYLFKRRFG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggacacggtgataaaagtggtcgaccaaataagaaattcaaattcacatcaaaggat
gattatagaagctcagtggctgatgatgatgttttttaccctgaagaagctggggatgat
tttcgcgatggcgggacagaaggaaaaaagagggattttagcaaattggaattgaagccc
gatcacgcgaaccgcccattatgggcttgtgcagatgggcgaattttccttgagactttc
tcttctttgtataagcaagcttatgattttctcattgccattgccgagcctgtttgcagg
cccgagtcaatgcacgagtacaatctaactccacattccttgtatgctgcggtgtcggtg
ggtttagagactgaaacaataatttcagttttgaataagttgtcgaagaccaagttgccg
aaagagatgattgattttatacatgcttctactgctaattacggtaaagtaaagctcgtg
cttaagaagaatcggtacttcattgaatccccatttcctgaggtattaaagaagttgcta
aaggatgaagttatagctaaagcaaggattcaacccgagagttcacatggaactgaggga
tttacaattagcaaagctgcgggggaaattggaactagtcatgatggattattgaatgaa
gcagaattggctgctgcagcagaagaaaaagaaactcactcatttgaagttgacccttca
caggttgaaaatgttaagcagcggtgcttgccaaatgctttaaattatccaatgttggag
gagtatgatttcagaaatgacactgtcaaccctgacctgaatatggaattaaagcctcat
gcacaaccacgaccatatcaagagaaaagcctcagtaaaatgtttggaaatggcagagca
agatctggcattattgttcttccatgtggagctggaaagtctctagttggtgtttctgca
gcttgtcgaataaagaaaagttgcctctgtttagcaacaaatgctgtttctgttgatcaa
tgggcctttcaattctcgctctggtcagacatttcacaggatcaaatttgtcgttttaca
tctgacagcaaagaacgattcaagggaaatgctggggttgtggtgacaacatataacatg
gttgcttttggtggaaaacgatcagaagaatctgaaaagattattgaagaaataagaaat
agggagtggggacttcttctaatggatgaggtccatgtcgttcctgctcatatgtttcgt
aaagttatcagcatcactaaatctcattgcaaacttgggcttactgcaacacttgtgaga
gaggatgaaaggattaccgatctgaacttccttattggtcctaaactatatgaagcaaac
tggttggatctagtaaaagggggtttcattgcaaatgtgcagtgtgctgaagtatggtgc
ccaatgacgaaagagttttttgctgagtatctaaagaaagaaaattcaaagaagaagcag
gcactttatgtgatgaatcctaacaaattcagggcatgcgaatttcttataagatttcat
gaagagcagcgccgtgataagataattgtctttgctgataatctttttgcactcacagag
tatgcaatgaaacttcacaagcctatgatctatggtgcaaccagccatgctgagaggaca
aaaattctccatgcgttcaaaactagtagtgaagtaaatactgtcttcttgtctaaggtt
ggtgataactcgattgatattcccgaggcaaatgtgataatccagatatcatcacatgct
ggttcaagaagacaagaagctcaacgattgggtcgtattctgagagcaaagggtaaactt
caagatagaatggcaggaggcaaagaagagtataatgctttcttctattctcttgtatct
actgatacacaggagatgtactattcaaccaaaagacaacagtttctgattgatcaaggt
tatagctttaaggtgataacaagcttgcctccagctgattcaggagctgatttgagctat
cacagtcttgaggatcaattgggacttcttgcgaaggttttgagtgctggagatgatgct
gttggtttagaacagctagacgaggatgcagatgacatagctcttcacaaaacccgtcgc
tatatgggatccatgagtgccatgtcaggtgcaaacgggatggtttatatggaatacagt
actgggcagaagggtgggaagggccagataaagggtaagcccaaggacccatccaagcgg
cattatttgttcaaaaggcgctttggctga
DBGET
integrated database retrieval system
