Populus euphratica (Euphrates poplar): 105129257
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Entry
105129257 CDS
T05872
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105129257
09123 Folding, sorting and degradation
03018 RNA degradation
105129257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105129257
03041 Spliceosome [BR:
peu03041
]
105129257
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105129257
mRNA cycle factors
Stress granule specific factors
105129257
Spliceosome [BR:
peu03041
]
Complex C
Other components
Complex C specific factors
105129257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
RRM_RdRP1_2
RRM_Nup35
RRM_7
RRM_MARF1
SET_assoc
GH97_C
Motif
Other DBs
NCBI-GeneID:
105129257
NCBI-ProteinID:
XP_011029544
UniProt:
A0AAJ6XST0
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MAQIQLHQSGASVPGPNGVAAGPGAIQFVPTSLYVGDLDFNVTDSQLYDVFNQVGQVVSV
RVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKPIRIMYSHRDPSIRKSGMAN
IFIKNLDKGIDHKALHDTFSSFGNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLN
GMLINDKQVYVGHFLRKQDRDGALYSIKFNNVFVKNLAESTTDEDLKNIFAEHGAITSAV
VMRDADGKSKCFGFVNFESADDAAKAVEALNGKKIDGEEWYVGKAQKKSERELELKGRFE
QSMKETVDKFQGLNLYIKNLDDSINDEKLKELFSDFGTITSCKVMRDPSGISRGSGFVAF
STPEEASRALAEMNGKMLISKPLYVALAQRKEERRARLQAQFSQMRPVTMAPSVASRMPM
YPPGAPGMGQQFLYGQGPPAMMPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQ
RPGGRRGGGPVQQTQQQVPLMQQQMLPRGRVYRYPPGRNMPDVPMPGVAGGMLSVPYDMG
GMPIRDAAQPMPITALATALANATPEQQRTMLGESLYPIVDQLEHDSAAKVTGMLLEMDQ
TEVLHLLESPDALKAKVAEAMDVLRTVAAQQQINSQADQLGSLSLNDNLVS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattcagctgcatcaatcgggggcttcggttccgggacccaacggagtggcg
gcgggacctggagcgatccagtttgtgccgacttcgctttatgttggtgatcttgacttc
aacgtgactgattcgcaactttacgacgtgtttaatcaggtcggccaggtggtttcggtt
agggtttgtagggatttgagtaccaggcgatctcttggctatggttatgttaactatagc
aaccctcaggatgctgctagggcattggatgtcttgaactttactccactcaataacaag
cctatcaggatcatgtattcccatcgggacccaagtattcgtaagagtggcatggcaaat
atatttatcaagaacctggacaagggtattgatcacaaagctttacacgacacattttct
tcatttggcaatattctttcttgcaaagttgctactgatgcttctggccagtccaaaggc
tatggttttgtacaatttgacagcgaggaggctgcacaaaatgcaatagataaattaaat
ggcatgttgatcaatgataaacaagtgtatgttggacactttcttcgcaaacaggacaga
gatggtgctctatatagcataaaattcaacaatgtttttgtgaaaaatctggctgaatcc
acaacagatgaagacttgaagaatatttttgctgaacatggagcaattactagtgctgtg
gtgatgagggatgctgatggtaaatcaaaatgttttggatttgttaactttgaaagtgca
gatgatgctgccaaagctgttgaggctcttaatggaaagaaaatcgatggtgaggagtgg
tatgttggaaaagcccagaaaaaatctgaaagagagcttgaattgaaagggcgatttgag
cagagtatgaaggagactgttgacaaatttcaaggcttgaatttgtatatcaagaatcta
gatgatagcatcaatgatgaaaaactcaaggaattgttctctgactttggtactattact
tcgtgcaaggtcatgcgtgaccctagtggtattagtagaggttctggatttgttgctttc
tcaactcctgaagaagcgtctcgagctcttgctgagatgaatggcaaaatgttgatcagc
aaacccctgtatgttgcccttgctcaacggaaggaagagagaagagcaagacttcaggca
caattttctcaaatgaggccagttaccatggcaccttcagttgcttctcgtatgccaatg
tatcctcctggtgctccaggtatgggacagcaatttctgtatgggcaaggacctccagcc
atgatgcctccccaggctggatttggctaccaacagcaacttgtccctggaatgaggcct
ggtggtgccccaatgccaaatttctttgttcctctggttcagcagggtcagcaaggccag
cggcctggagggcgacgtgggggtggtcctgttcaacagactcagcagcaagtccctctc
atgcagcaacagatgcttccgaggggacgcgtgtatcgttacccaccaggtcgcaacatg
ccagatgtaccaatgccaggtgttgctggcggcatgctttctgttccttatgacatgggc
ggcatgccaatacgtgatgctgcacagcccatgcccattactgctttagctactgccctg
gcaaatgcaacacctgaacagcagaggacgatgctgggtgaaagtctataccccatagtg
gatcagcttgagcatgattcagctgccaaggttacaggcatgcttctggagatggatcaa
actgaggtgctgcaccttcttgagtcaccagatgctttgaaggcaaaagtggcagaagct
atggatgtccttaggactgtagctgctcagcagcagatcaacagtcaagcggatcagctt
gggtcactgtctctgaatgacaatcttgtctcttaa
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