Populus euphratica (Euphrates poplar): 105129362
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Entry
105129362 CDS
T05872
Name
(RefSeq) nuclear pore complex protein NUP54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105129362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105129362
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105129362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Dzip-like_N
TMEM192
Motif
Other DBs
NCBI-GeneID:
105129362
NCBI-ProteinID:
XP_011029678
UniProt:
A0AAJ6TMJ6
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MFGTPSSTPAFGTPSSTPPSGTPSSTPLFGTPSTPAFAAGGFGSSLFSTPLASQTQQQQQ
TSLFQQPSTTGFGFQQQQKQNPFATPLQTTPFPSPPPPPHLSTQMAFVAPLLFSLADRDI
QAIVDAYKEDPGNLKYAFKYLLLSVTDPQHRGKLAGVSDIMWAESMAKLEGMEGPDRERL
WPQLVQGFKDLSHRLKLQDEVIVSDAERLQMTQINIKMLQRHFQAVALPRIERMRRKERS
LQRHLLRVMRIMEALEGKGFRLPLTKAEAELAEKSAAIIRQLKGSGAELSRRVQNLLTVS
RVQENGIGAGGSLYIPGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDNRDMEIMMAE
GTEMQNN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcactccatcttccacccccgccttcggcacgccgtcttccaccccgccatcc
ggaaccccctcttctactcccttattcggcactccttcaacgccagctttcgctgctgga
ggattcggttcatctttattctctactccgcttgcttctcaaactcagcagcagcagcaa
acctcgctttttcagcaaccgtctactactggtttcggatttcaacagcaacagaaacag
aatccgttcgctacgccgcttcaaacgacaccgttcccttctccccctcctcctcctcat
ttgagtactcagatggcattcgttgctcctcttcttttctctctcgccgatcgcgacatt
caggcgattgtggatgcttataaagaggaccctgggaaccttaagtatgctttcaagtat
ttgttgttaagtgtaactgacccgcagcatagagggaagcttgctggtgtatcagacatc
atgtgggcggagtctatggcgaagctagagggtatggaaggtccagatagagaacgcctc
tggcctcagcttgttcaaggtttcaaagatctttcacaccgcctcaagctccaagatgaa
gtaattgtttcagatgcagagagattgcaaatgacccaaatcaacataaaaatgcttcaa
aggcattttcaagctgtggctcttccaaggattgaaagaatgagacggaaagagcgaagt
cttcagaggcatcttttaagggtgatgagaataatggaggcattggagggtaagggtttc
cgattgcccttaacaaaagcggaagctgagttggctgagaagtcagctgcaataattaga
cagctaaaaggatctggtgcagaactttctaggagggttcaaaacctactcactgtatct
cgtgttcaagaaaatggaattggtgctggaggttctctttatattccaggatcaaccaaa
atacatgaacaaagtcttgccgatatgcaggaggttttacaacagcagactgaagctatt
gcaaggcttggcaacgtgttgaagcgagacaacagggacatggaaattatgatggccgag
ggcacagaaatgcagaataattga
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