KEGG   Populus euphratica (Euphrates poplar): 105129395
Entry
105129395         CDS       T05872                                 
Name
(RefSeq) pre-mRNA-processing factor 17-like
  KO
K12816  pre-mRNA-processing factor 17
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105129395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:peu03041]
    105129395
Spliceosome [BR:peu03041]
 Complex C
  Other components
   Step II factors
    105129395
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_DCAF4 WD_LRWD1 WD40_MABP1-WDR62_1st eIF2A Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 105129395
NCBI-ProteinID: XP_011029733
UniProt: A0AAJ6UH03
LinkDB
Position
Unknown
AA seq 580 aa
MDLLQNYHNDDELDEHGQNPNSSPDSSSPPRLLPSKSAAPKVDDTMLALTVANQTLSKPI
DPVQHAVAFNPTYDQLWAPVLGPAHPYAKDGIAQGMRNHKLGFVENAAIDSFVFDEQYNT
FHKYGYAADPSASAGNNYVGDLDTLEKTNGISVYNIPQHEQKKRKIEKKREVTGEEGNDD
DVMDKEEVDNPATDAWLMKNRKSPWAGKKEGLQTDLSEEQQKYAEEHARKKAEKAGGEKG
EVVADKTTFHGKEERDYQGRSWLAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRFFP
KYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKY
WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMKSGQITQEYDQHL
GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPNSNWLAA
QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
NT seq 1743 nt   +upstreamnt  +downstreamnt
atggatcttctccaaaactaccataacgacgacgaattagacgaacatggccaaaaccct
aattcctctccagattcatcctcccctccgcgcctcctcccttccaaatccgccgctccc
aaagtggatgacaccatgctagccctaacagtagccaatcagaccctctcaaaacctatt
gaccccgttcagcacgccgtcgccttcaaccctacttacgaccagctatgggctccggtt
ctaggccccgcccatccctacgccaaggacggaattgcccagggcatgcgcaaccacaag
ctcggcttcgtcgagaacgctgccatcgactccttcgtcttcgacgagcagtataacact
ttccacaagtatggctacgcggcggacccgtccgcctctgcaggtaataattatgttggt
gatttggatactttagagaaaactaatggaatttctgtttataacattccgcaacatgaa
caaaagaagcgaaaaattgagaagaaaagggaagtaaccggggaagagggtaatgatgat
gatgtaatggataaggaggaggtcgacaatccggccacggatgcgtggttgatgaagaat
aggaagagcccttgggccggtaaaaaggagggattacaaactgatttgtctgaagagcag
caaaaatatgcggaggagcacgcgagaaagaaggcggagaaagctggcggtgagaaaggt
gaggttgtggctgataagactacttttcatggtaaagaagagagggattatcaagggagg
tcgtggcttgcgccacctaaagatgctaaagcaagtaatgatcattgctatatacctaag
aggttggtgcacacatggagcgggcatactaaaggagtctctgctataaggtttttccct
aaatatgggcacttgatactttctgcgggtatggatacaaaggtgaagatatgggatgtg
tttaattcgggcaagtgtatgagaacttacatgggtcattctaaggctgttagggatatt
tcattttgtaatgatggcactaaatttttgactgctagttatgataagaatattaagtac
tgggatacagagactggccaggttatctctacgttttctactgggaagattccgtatgtt
gttaagctcaatcctgatgatgataagcagaatatattgttggcgggcatgagtgataag
aagattgtgcagtgggatatgaagtcagggcagattactcaggagtatgaccagcatttg
ggggcagtgaataccatcacttttgtggataataataggagatttgttacttcaagtgat
gataaatcactccgtgtatgggaatttgggatccctgttgttataaagtacattagtgag
cctcacatgcattctatgccggcaatctctcttcatcccaattcgaattggcttgctgcg
cagagtttggataaccagatccttatttatagtaccagggagagattccagttgaataag
aagaagagattcgctgggcacattgtggctggttatgcttgtcaagtcaatttctcacca
gatggacgatttgttatgtcaggagatggtgagggtaaatgctggttttgggactggaag
agctgtaaagttttcaggaccctcaaatgtcacgagggagtctgcattgggtgtgagtgg
catccactagagcaaagtaaagtggcaacttgtggctgggatggcttgattaaatactgg
taa

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