Populus euphratica (Euphrates poplar): 105129648
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Entry
105129648 CDS
T05872
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105129648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105129648
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105129648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
105129648
NCBI-ProteinID:
XP_011030097
UniProt:
A0AAJ6UHJ0
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MVGAGSAVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQE
HNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAI
WWRPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQR
YGPVISTIPQQLSRFQFNMITTT
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggtaggggcagggtcagctgtggtgaatacataccctttatcaagctacacatttggt
actaaagagcccaagatggagaaagacacttctgttgctgatcgacttgctcgcatgaaa
gtaaattatatgaaagaggggatgaggacaagtgtggaagctattttgctggtacaggaa
cacaatcatcctcacatacttcttctgcaaattggaaacacattctgcaaacttcctggt
gggcgtttgaagcctggagagaatgaaattgagggtttgaaaagaaagctgacaagcaaa
cttggggctaactcacctgctcttgtgccagactggcagattggtgaatgtgtggctatc
tggtggaggccaaactttgaaaccattatgtatccatattgccctccacacataacaaag
cccaaggaatgcaagaaactttaccttgttcacttatctgaaagagagtactttgcagtg
ccgaaaaatctgaaattgcttgctgtgccattgtttgagctctatgataatgtgcagaga
tatgggccagtcatttcgaccattcctcaacagctttcaagattccagttcaacatgatt
actactacttga
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