Populus euphratica (Euphrates poplar): 105130366
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Entry
105130366 CDS
T05872
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03440
Homologous recombination
peu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105130366
03460 Fanconi anemia pathway
105130366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peu03032
]
105130366
03400 DNA repair and recombination proteins [BR:
peu03400
]
105130366
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105130366
DNA replication proteins [BR:
peu03032
]
Eukaryotic type
DNA Topoisomerases
105130366
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
105130366
FA (Fanconi anemia) pathway
105130366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
105130366
NCBI-ProteinID:
XP_011031137
UniProt:
A0AAJ6XTW9
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MIKVLNVAEKPSVAKSVATILSRNQLRVRDGRSRYNKIFEFNYSINGQQCHMLVTSVTGH
LMEVEFEDRFRKWHSCDPADLYTAPIRKYVPEDKLDIKRTLEEEARRCHWLVLWLDCDRE
GENIAFEVMAVCKGVNRNLTIRRARFSALIERDIHEAAQNLIAPNQWFSDAVDARQEIDL
RIGASFTRFQTMLLRDRFVIDSAQDDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEEFW
TINCTHRSDEGLASFSWMRGHLFDYTSSVILYEMCVEEPTATVTKVQQQEKLKYPPYPLS
TIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYPRTETDSFSSRTDLHTIVQEHQEHPV
WGSYAQRLLDPGAGLWRNPSSGGHDDKAHPPIHPTKFSSGESRWSQDHHRLYELVVRHFL
ACVSQPAVGAETVVEIDIAGERFSASGRVILAKNYLDVYRFESWGDSMIPTYVQGQQFIP
TTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYVTKDANTRFSPT
NLGEALVMGYDDMGYELWKPNLRSLMEYDMKEVSMGNKSKAEVLATCLQQMKACFLDAKV
NKVKLLEAMAIFFNRSDRSNGDDSSVLGENVRPCGLCQEANMVLRKNRDGNFMVGCSGFP
QCRNAVWLPGPVLEATITNNICNSCTPGPVYLIQFKFRQLEIPPGFNVNHLGCIGGCDET
LRQLIEICGTGSRVQARGRPPTTTPSNGPPTSTPSNPQRSNSRQAPCIYCYQTGHASTDC
PSRISATRHVQSHGMNQQNAGESSIPCSTCGTSCVLRTANTANNRGRKFYSCSSQACNFF
VWEDNLNNGSAPRSAPRPNISNSASNPSRRGGRGRGVQNAGRAADVTFVSATGEPISGRR
CFVCGDPSHFANACPSRGS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagttctgaacgtggcggagaagccttctgtggcgaaatcggtggcgacgata
ctctcacgaaatcagcttcgagtgagagacggacggtcccggtacaacaagatattcgag
ttcaactactccattaatggccaacaatgccacatgcttgtcacttcagtcactggtcat
ctcatggaagtcgaattcgaagatagattccgtaaatggcattcttgtgaccccgccgat
ctctacaccgctcccatacgcaaatacgtccctgaggataagttggacatcaaaaggaca
ttggaggaggaagcgaggaggtgtcattggcttgttttgtggttagattgtgatagagaa
ggagagaacattgcatttgaagtgatggcagtttgtaaaggtgtaaatagaaatcttaca
ataaggagggctcggttttcggctctaattgagagggatattcatgaagcagcccaaaat
cttattgctcctaatcagtggttttcagatgcagtggacgctaggcaagaaattgatctc
cgaattggtgcttctttcactaggtttcaaacgatgttgttgagggataggtttgttatt
gattctgctcaagatgatagaaatcttgttctaagttatgggccttgtcagttccctacc
cttggatttgttgtggaacgttactgggagatacaatcacatgagccagaagagttttgg
actatcaattgtactcatagatcagatgaaggccttgcttctttcagttggatgcgtgga
catctttttgattatacctcatctgttatactttatgaaatgtgtgttgaggaaccaact
gcaacagtcacgaaggtccagcagcaggagaagttgaagtatcccccatatcctttgagt
acgattgagcttgaaaaacgtgcttcacggtacttccggatgagttctgaacaaaccatg
aaggtggcagaagacttgtaccaagctggtttcattagttatcctcgtacggagactgac
agcttttcttccaggactgatttgcatacaattgtacaagaacatcaagagcatcctgta
tggggatcgtatgcacaaagattgttagatcctggagcaggactttggaggaaccctagt
agtggtggacatgatgacaaggcccacccacccatccacccaacaaaattttcatctgga
gaatcccggtggagtcaagatcaccatagattgtatgagctggttgttcgacattttctg
gcatgtgtctcacagccagctgttggggccgaaactgttgttgaaattgatattgctggt
gaacgtttttctgcatcagggagagtgatattagctaaaaattacttggatgtttatcgc
tttgaatcatggggtgattcaatgattccaacctatgtccagggacaacagttcattccg
acaacattgactttggactctggtgtcactagaccgccgcctctcttaagtgaagcggat
ttgttaagttgtatggacaaggctgggattggtacagacgcaacaatgcatgatcacatt
aaaaagctgcttgatcgattctacgtcacaaaggatgcaaacactcgcttctcacctact
aatcttggtgaggcacttgttatgggatatgatgacatggggtatgaactttggaaaccc
aatctgagatcactgatggagtacgatatgaaagaagtcagcatgggcaataaaagtaaa
gctgaagttttggcaacttgcttgcagcagatgaaagcttgtttcttagatgcaaaggta
aacaaagtaaaactcttagaagccatggcaattttctttaacagatctgatagatcgaat
ggagatgacagtagtgtgttgggggaaaatgttcggccatgtggactttgccaggaagca
aatatggtgcttaggaaaaaccgggatggcaatttcatggttggatgctcgggttttcca
cagtgcaggaatgctgtgtggctccctggacctgttttagaagccaccataaccaacaat
atttgcaactcttgcactccaggtcctgtttacttgatccaatttaagttccgccagctt
gaaataccaccaggcttcaatgtcaaccacttgggttgcatcggtggttgcgatgaaact
cttagacagttgatagaaatctgtggaactggttctcgtgttcaagcaagaggtcgacca
ccaactacaacacccagcaacggaccacccacttcaacacccagcaacccccaacgaagt
aactctaggcaggcaccctgcatatattgttatcaaacagggcatgcttcaactgattgc
ccttcacggatttcagccactcgacatgtgcagtctcatggaatgaaccaacagaatgca
ggagaatcttcaattccatgtagcacatgtggaacatcatgtgttctgcgaacagctaac
acagcaaataacaggggaagaaagttctattcatgttcatcacaagcatgcaacttcttt
gtatgggaggataacctcaacaacggctctgccccaagaagtgctcctcgtccaaatatc
agtaactcggcatctaaccctagtaggaggggcggtcgtgggaggggtgttcagaatgca
ggacgtgcagctgatgtaacttttgtatcagctacaggtgagccgatttctggaagaaga
tgcttcgtgtgtggtgatccatcacacttcgccaatgcttgccccagtcgtggttcctga
DBGET
integrated database retrieval system
