Populus euphratica (Euphrates poplar): 105131024
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Entry
105131024 CDS
T05872
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
peu03015
mRNA surveillance pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105131024
09122 Translation
03013 Nucleocytoplasmic transport
105131024
03015 mRNA surveillance pathway
105131024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105131024
03041 Spliceosome [BR:
peu03041
]
105131024
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
105131024
Spliceosome [BR:
peu03041
]
Common components
Common spliceosomal components
Cap binding complex
105131024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G
MIF4G_like_2
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
105131024
NCBI-ProteinID:
XP_011032083
UniProt:
A0AAJ6UM90
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MSSWRSLLLRIGDNCPDYGTSSDLKEHVETCFGVIRRELEHSSNDILSFLLQCAEQLPHK
IPLYGTLVGLLNLENEDFVKQMVETTQANFQDALDFGNCDMIRILMRFLTVMMCSKVLQP
SSLVVVFETLLSSAATTLDEEKGNPSWQARGDFYVSCILSCLPWGGSELVEQVPEEIESV
MVGIEAYLSIRRHNSDTGLSFFEDDDESGRGIVEKDFLEDLWGRIQVLSSNGWKVDSVPR
PHLSFEAQLVAGKSHEFGPINTPEQPEPLSEVSGVLYGKQKHDAELKYPQRIRRLNIFPA
SKIEDMQPIDRFIVEEYLLDVLLFLNGCRKECASFMVGLPVPFRYDYLMAETIFSQLLLL
PLPPFKPIYYTLVIMDLCKALPGAFPGVVAGAVRALFEKIADLDTECQTRLILWFSHHLS
NFQFIWPWEEWAFVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPPK
GSPNFIYSIEDGREKTEQHALSAELNNKVKGRQTAREIISWVEESVFPNHGWDVALKVVV
HTLLDIGSKSFTHLITVLERYGQVFARICPDHDKQVMLIAEVSSYWKNNAQMTAIAIDRM
MGYRLISNLAIVRWVFSPANIEQFHTSDRPWEVLRNAISKTYNRISDLRNEISSLKKSVV
SAEEAATKAKTELDAAESKLSLVDGEPVLGDNPVRLKRLKANAEKAKEEEVSVHESLEAK
EALLARALDENEALFLSLYKNFSNVLMERLPDPSRARTLRELKSIQADEMTMDLDESSVM
EVDNESGRPNKSQLNGGKESNIYNVGEREQWCLSTLGYVKAFARQYASEIWAHIEKLDAE
VFTENVHPLFKKAVYSGLSRPINDV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggagaagtctccttcttcgaatcggcgacaactgccccgactatggcacc
agctccgacttaaaagaacacgttgaaacttgcttcggtgttattcggcgagagttggag
cactcttctaacgatattttatctttccttctccagtgtgctgaacagttgcctcacaag
attcctttatatggaactttggttggcctactgaacttggagaatgaggacttcgtgaag
caaatggtggagacaactcaagctaattttcaggatgccctagattttggaaactgtgac
atgattcgcattttgatgcgctttcttactgttatgatgtgcagtaaagttctccaacct
tcttctctggtagttgtctttgaaacactcttatcatctgctgccacaacattggatgag
gagaaaggaaatccttcctggcaagcccgtggggacttttatgtaagctgcattttatcc
tgtcttccatggggaggatcagagctcgttgagcaagttcctgaagagattgagagcgtc
atggttggtatagaagcttatttgagcattagaaggcataattctgataccggattgtct
ttttttgaggatgatgatgaatctgggaggggtattgttgagaaggatttcttggaagat
ttatggggtcggattcaagtactatctagcaatggatggaaagtagacagtgtacccaga
cctcatctttcgtttgaagctcagctggttgctgggaagtctcatgagtttgggcccatc
aacactcctgagcaacctgagccactttcagaagtctctggggtactttatggtaaacag
aagcatgatgcagagttaaagtatcctcaaaggatacgcaggcttaatatatttcctgcg
agtaaaattgaggatatgcaacccatagatcgcttcattgtggaagagtacttgctggat
gtacttttgttcctcaatggatgtcgaaaggaatgtgcctcgttcatggttggcctgcct
gtaccatttcgttatgactatctcatggcagagacaattttctctcagttacttttgcta
ccattaccacctttcaagccaatatattacacacttgtgataatggacctttgtaaggct
cttcctggagcctttcctggtgttgtagctggtgcagttcgtgcactttttgagaaaata
gctgatttagatacggagtgtcagacaaggctcatcctttggttttcacaccatctgtca
aactttcaattcatctggccatgggaagagtgggcttttgttttagacctgcctaagtgg
gccccacagcgtgtgtttgttcaagaggtcttggaaagagaagtccgtttgtcatactgg
gacaaagttaagcagagcattgagaatgcacctgctttagaagagttgcttccaccaaag
ggtagtccaaactttatatacagcatcgaagatggtagagaaaaaactgagcagcatgct
ctgtctgcagagctcaacaacaaggtgaagggaaggcaaactgctcgagaaataatctca
tgggtagaagaaagtgtatttcctaatcatggttgggatgtcgcccttaaagtggttgta
catacccttcttgatatcggttctaaaagtttcactcatttgatcactgttttggagaga
tatggccaagtatttgcacgaatttgtcctgatcatgataagcaggttatgctgatagct
gaagttagttcatattggaagaacaatgctcaaatgactgccatagcaatcgacagaatg
atgggttatcgactaatttctaatttggcaattgtgagatgggtattttctccagcaaac
attgagcaatttcatacatctgatcgtccatgggaggttcttagaaatgctatcagcaag
acttataaccgtatatctgatctaagaaacgagatatcatctcttaagaagagtgttgta
tcagctgaagaagcagcgacaaaggcaaaaacagagttagatgctgctgagtcaaagctc
tctcttgtggatggtgagcctgttcttggtgataaccctgtgaggttgaagcgcttgaaa
gcaaatgctgaaaaggcaaaagaagaagaggtgtctgtgcatgagtctttggaggccaag
gaggctcttcttgctcgtgcccttgatgaaaatgaggcattgttcctctctttgtacaaa
aacttctcaaatgtgttgatggaacgtctacctgatccatctagagctcgaacattgcgg
gaattaaagtcaattcaagcggatgaaatgaccatggatctcgatgaatcatcagtaatg
gaagtggataatgagagcgggagacccaacaaaagtcagttgaatggaggaaaggaaagc
aacatctataatgtgggagagagagagcaatggtgtttatcaactcttggctatgtcaag
gcctttgcaagacagtatgcttctgagatatgggctcacatcgagaagctagatgcagaa
gtattcacagaaaatgtgcatcctcttttcaagaaagctgtttattctggtttaagtcgg
ccaatcaatgatgtgtga
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