Populus euphratica (Euphrates poplar): 105131086
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Entry
105131086 CDS
T05872
Name
(RefSeq) zinc finger CCCH domain-containing protein 49-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105131086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105131086
Spliceosome [BR:
peu03041
]
Complex B
Other components
Prp19-related factors
105131086
Complex C
105131086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH
RRM_occluded
zf-CCCH_3
zf-CCCH_4
zf-CCCH_12
RRM_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
105131086
NCBI-ProteinID:
XP_011032177
UniProt:
A0AAJ6UMQ4
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MAHRLLKDPEADGWERSDFPIICESCLGDNPYVRMTRADFDKECKICTRPFTVFRWRPGR
DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE
EHDRRARAGIDYESSYGKAQANDTILKLQRTTPYYKRNRAHVCSFFARGECTRGAECPYR
HEMPITGELSQQNIKDRYYGVNDPVAMKLLNKAGDMPSLEPPEDESIKTLYVGGLDARIN
EQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQAPKPEMESSDEARQQAPMAHSGMLPRAVVSQQHNQLHPPGMQDQHPPMHYFNIPPPAQ
QERTFYPSMDPQRMGALVGSQDGTPNGPAGSGENKSGLEKQQGQHYPYQSMPPPHVQYQQ
QHYPPYGYMPPMPPYQQYPPPYHSPVAPQQVVQSTQQYQHLVPAPRAAPAGSMTSVPSPQ
GSRAPAGSMPSGPPPQGAEAPAGSKPSGPPSPRPGEPEESKPSGPPP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaggttgttaaaagacccggaagctgacggatgggaacggtctgactttcct
atcatttgcgagtcttgcttaggtgacaatccctatgtcagaatgaccagagctgacttc
gataaggaatgcaagatatgcactcgaccatttacagtgtttaggtggaggcctggtagg
gatgcgagatttaaaaagactgaagtttgccagacttgcagtaagttgaaaaatgtctgt
caagtctgtcttttggatctagagtatggtttgcctgttcaagttcgtgatactgctctc
agtataaattccaatgatgctattccaaagagtgatgtgaatagagagtattttgccgag
gagcatgaccgaagggctagggcgggaattgattatgagtcttcatatggaaaggctcaa
gcaaatgatactattctgaagcttcaaagaacaacaccatactacaaaagaaatcgagca
catgtttgtagcttctttgcacgtggtgaatgcacacgaggtgccgaatgcccctatagg
catgagatgcccataactggggagttatcacagcaaaatattaaagatcgttattatgga
gtgaatgatcctgtggcaatgaagctactcaacaaggctggagacatgccctcattagaa
ccaccagaggatgaaagcattaaaacgctctatgtaggtgggcttgatgcgaggatcaat
gagcaggacctaagggatcaattttatgctcatggcgaaattgaatccataaaaatggtg
cctcaaagagcaattgcttttgtaacctatacaaccagagaaggagcagaaaaagccgcg
gaggagctctctaacaagcttgtcatcaagggtctgcgtctgaaattgatgtggggtaga
ccgcaagcaccaaaacctgagatggaaagttctgatgaagcaaggcagcaagcaccaatg
gcccatagtgggatgttgccccgtgcagttgtatctcagcaacacaaccaattacatcca
cctggcatgcaggaccaacatcctccaatgcactatttcaatatccccccaccagctcag
caagaacgaacattttacccgtcaatggatcctcaaagaatgggtgcccttgttggatcc
caagatggtactcctaatgggcctgcaggatcaggtgagaataaatctggattggagaag
cagcaaggtcagcactatccatatcaaagtatgcccccacctcatgtgcaataccaacaa
cagcattatccaccatatggttatatgcctccaatgccaccgtatcagcagtatcctcca
ccatatcattctccagtggccccccaacaggttgttcaatccacacagcagtatcagcat
cttgtgccagcaccaagggcagcacctgcagggtccatgacctccgtgccatcacctcag
ggatcccgagcacctgcagggtccatgccctctggacccccacctcagggagctgaagca
cctgctgggtctaaaccctccggcccaccatctcctagacctggagaacctgaagaatct
aaaccctcagggcccccaccttaa
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