Populus euphratica (Euphrates poplar): 105131257
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Entry
105131257 CDS
T05872
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105131257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105131257
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105131257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
105131257
NCBI-ProteinID:
XP_011032462
UniProt:
A0AAJ6UNJ9
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MMDYTLPISKRTRLREAEVYKKLHDEIRKGRNQGKESNAAATVSTNGLNGALEESVGGLS
YKGSRSPVVLDDSEDDAFLDDCENGGLEERLDVVSLDDSNDDDDQSEGVESKSFDVDGKK
SERTDAVGSCSVVKSDGEESGRSKVPLPRWKRIVNESYNGDVFAHERNEGGVCFLSSGIG
NGSGGVGLKGRDSNGVAGRADLQSGFCEKNKDGNVVVVGDDDDVACIILEKDADELQISS
SGEEETFKDDEHHRVELPESFMVEEEEKEEDGDREQGEMELKRNKVYGIEVLCDSDIGKI
ENNDVDMDDSVCVAKRTRSHYNLESAKKRMKLETVSRPLCVDEEKLDDNGDNDEDDTETY
EAVDVAKKVRSKKGKTKPTGGHGGDVDDGDETCDHRSQRRIIESRKGSRDEHGHGVCGRK
PSKRRRKEYEVVKILANSIFLDQKDVPFKEEREPLEEPVLPLKFTFGIEESSPPVKSEEE
KQLEELWADMALALCLKDTTDDSTLDENDDDAHEVEPDTVTLCRQGNHELYLDEEIGLLC
KYCSFVDLEIKYHVPPFDRYPRGKSARRDFVTMQHNIFNDLHHQDSGRGTHPDYDPCTLA
QGTVWNLIPGIGKGMHGHQREGFEFLWKNIAGGIYLDKLKDNSNLNGGTGCIISHAPGTG
KTRLTIVFLQTYMQLYPTSRPVIVAPCSMLLTWEAEFLKWGVDIPFHIMNKKNLSGKENR
TAMDLFRELKPAERGLNAIRMVKLYSWKKERSILGISYRLFEELVGEEKSKTKVSDKTED
DQVRKVLLELPGLLVLDEGHTPRNDRSRIWKALSKVRTQKRIILSGTPFQNNFDELYNTL
CLVKPKFAEEISSKHHRAFPKRRDCKRNTDARRNWASLTTAIGKVTDHKLEAQRVEELRK
MIWQFVHVHKGGVLRERLPGLRDSVVILQPVHLQKTLLENFKQINGLDHFEMEYSLSVLS
VHPSLLPEKSVGTLDFVDRMELEMLRSKPEAGIKTKFLMELIRLCQARNEKVLVFSQYLE
PLNLVIKQLELNFSWIQGEDMLYMHGKLKIDERQTLIKHFNNASSNAKVLLASTRACSEG
INLVGASRVVLLDVLWNPSVERQAISRAYRLGQEKVVYIYHLITSGTMEEEKYFCQVEKE
RLSKLVFDCTNRSSNHQTGVFDIAEDKKDRILEEMVQHDKLKLMFKKIVYQPKDTNLVKS
FNLDL
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgatggactatacattgcctatatctaaaaggaccaggcttagagaagctgaagtgtat
aagaaattgcatgatgagattaggaaagggagaaaccaagggaaggaaagcaatgctgcc
gctactgtgtcaacgaatggacttaatggtgctcttgaggaaagcgttggcgggttgtct
tacaaaggtagtagaagtccagttgtcttggatgatagtgaagacgatgcgtttttggat
gactgtgaaaatggggggcttgaggaacggttggatgttgtttcccttgacgatagtaat
gatgatgatgaccagagtgagggagtagagagtaagagttttgacgttgatggtaagaag
agtgagagaacagatgcggttggaagttgtagtgtcgtgaaatctgatggagaggagagt
gggagatcaaaggttcctcttcctcgttggaagagaattgtgaacgagagttataatggt
gatgtttttgcgcatgagaggaatgagggtggcgtgtgttttttgtcgagtggaattggg
aacggaagtggtggggtcggtttgaaggggagggacagtaatggggtagccggaagggct
gatttgcagtccgggttttgtgaaaagaacaaggatggtaatgttgttgttgttggtgac
gatgatgatgttgcttgtattattttggagaaggatgcagatgaattgcagatttcttct
agtggagaagaggaaacctttaaagatgatgagcatcatagagtggagttaccggagagt
tttatggttgaggaggaagagaaagaagaggatggtgatagggagcaaggtgagatggaa
ttgaagaggaacaaagtttatggaattgaagtgttatgcgactctgatattggtaaaatt
gagaataatgatgtcgacatggatgattctgtttgtgtggcaaaacgtacccgatcacac
tataatttggaatcggctaagaagagaatgaagcttgaaacagttagccgaccactttgt
gttgacgaggagaagttagatgataatggtgacaatgatgaagatgatactgaaacctat
gaagcagttgatgttgcgaagaaagttcggtctaagaaaggaaaaactaaaccaacagga
gggcatggtggtgacgttgatgatggtgatgagacttgtgatcataggtctcagagaagg
ataattgagtctagaaaaggcagtagagatgagcatgggcatggtgtatgtggaaggaag
cctagtaaaagaaggcgaaaagaatatgaagttgtcaaaattcttgcaaattccattttt
ctggaccagaaagatgtgcctttcaaagaagaaagggaaccactcgaggagccagttctt
cctctgaagttcacatttggaattgaagagtcaagtcctcctgttaaatcagaagaggag
aaacaattggaggaactttgggctgacatggccttagctctttgcttgaaggataccact
gatgattcaacgctggatgaaaatgacgatgacgcccatgaggttgaacctgatacagtc
accctttgtcgtcaggggaatcacgagctttatcttgatgaagaaattggacttctgtgc
aaatattgctcttttgtggatttggaaatcaaataccatgtgcccccttttgatagatat
cctagggggaaatcagctaggagagacttcgtgacaatgcaacacaatatcttcaatgat
ctccatcaccaagattctggtcgtggcacacatcctgattatgatccttgcactcttgcg
caaggcacggtgtggaacttaattcctggtattggaaagggtatgcatggacatcagcgt
gaaggctttgagtttctgtggaaaaacatagctggaggtatttatcttgacaagctgaaa
gacaattctaacttaaatggtgggacaggatgcattatatcccatgctcctgggactggg
aaaacccgcctaaccatagtgtttctccagacatatatgcaattatatccaacaagcagg
cctgtaatagttgctccttgcagcatgctccttacatgggaagcagagtttttgaagtgg
ggggtcgacattccctttcacattatgaacaagaaaaatctttctggaaaagaaaatagg
acagctatggatcttttcagggaacttaaacctgcagaacgtggtttaaatgccatccgc
atggtgaaattatattcctggaaaaaggagaggagtatcctggggatcagttacagactt
tttgaagaacttgttggtgaagaaaagagtaaaaccaaagtatcagataagactgaagat
gaccaggtaaggaaagtccttcttgaacttcctggtcttttagtccttgatgaaggacat
acacctcgaaatgacaggagtcgtatctggaaagctttgtcgaaggtccgaacacaaaaa
cggattatactctcaggaacacccttccaaaataactttgatgagctttacaacacactg
tgcttggtaaagcctaaatttgcagaagagatctcgtccaaacaccatagagcttttcct
aaaaggcgtgattgcaagagaaatactgatgcgagaaggaattgggcctccttgacaact
gcgattggcaaagtcactgaccataaactggaagctcagagggtcgaagagcttagaaag
atgatttggcaatttgtgcatgtacacaagggtggtgtgctacgagaaagactccctgga
ttgagggactctgtggttatcttacagccagtccatttgcagaagacccttcttgaaaat
tttaagcaaattaatggcctggatcattttgagatggaatattcgttgtctgtgctttct
gtacacccttctctgttgccagagaaatcagttggaaccctggactttgttgatcggatg
gagttagaaatgcttagatcaaaacctgaggctggaatcaaaacaaaatttcttatggaa
ctcattcggctttgccaggcgaggaatgagaaagttctggtgttcagtcaatatcttgag
ccactgaacttggtaatcaagcagcttgagttaaatttcagttggatccaaggagaagat
atgttatatatgcatggaaagcttaaaatagatgaacgtcaaacattgattaagcatttt
aacaatgcaagtagtaatgcaaaagtgttgctcgcatcaactagagcttgttctgaaggg
ataaatcttgttggtgcttcaagagtggttttgcttgatgttttgtggaacccatcagtg
gaaaggcaagccatcagtcgcgcctacaggctagggcaagagaaagttgtctatatttac
catctcattacttcagggacaatggaagaggaaaagtatttttgccaagttgagaaagag
cgattgtcaaagctagtgtttgattgcacaaacagaagtagcaatcatcagacaggtgta
tttgatatcgcagaagataaaaaggatagaattctagaagaaatggttcaacatgacaag
cttaaactcatgtttaaaaagattgtgtaccaaccaaaagataccaatctagtcaaatct
ttcaacttggatttgtaa
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