Populus euphratica (Euphrates poplar): 105131736
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Entry
105131736 CDS
T05872
Name
(RefSeq) apurinic endonuclease-redox protein-like isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105131736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105131736
Enzymes [BR:
peu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
105131736
DNA repair and recombination proteins [BR:
peu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
105131736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
105131736
NCBI-ProteinID:
XP_011033157
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MSLQALQIGVKSFINLSSFAARPRSLKIGQLGSLRLRVMSSKRGVSSSIKSAAASIVDDK
KDSKLKGMSGDCSEDVLIEESCWKVQSVEFQSIKEDPAKIEAMTVQELRATLRKFGVPAK
GRKGDLVFALKHFMGKQIDGESSQELEERVSFNSLENISLQKNTKRTSDESSVVSINTVS
EVSGFKQSKRRMKQSYVEDEIVKVDTEIVTSKRKLSIKTDDLVTLPQAEPWTVLSHKKPQ
KGWIPYNPRTMRPAPLTDGNSVKLMSWNVNGLRALLKFEGFSALELAQRENFDVLCLQET
KLQEKDVDSIKQCLIDGYENSFWTCSNAKLGYSGTAIVSRIKPLSVCYGLGIPDHDCEGR
VVTAEFDSFYLVNTYVPNAGDGLKRLSYRITQWDPSLSNYMKELEKSKPVILTGDLNCAH
QEIDIYNPAGNKRSAGFTEEERQSFGSSFLSKGLVDTFRKQHPNVVGYTYWGYRHGGRKA
NKGWRLDYFLVSESIADNVHDSYIVPDVNGSDHCPIGLVLKV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcaagcgttgcaaataggggtcaagtctttcattaatctctccagttttgca
gctaggccaaggagcttgaagattggacaactaggttctttgagattaagggtgatgagt
tctaaacgaggtgtctcgagttcaatcaaatctgctgctgcttcaattgttgatgataag
aaagatagtaaacttaaggggatgagtggtgattgtagtgaggatgttttaatcgaggaa
agttgctggaaagtccagtcagttgaatttcaaagtatcaaggaagatccagcaaaaata
gaagcgatgacagttcaggaacttagagcaacattgaggaaatttggagtccctgccaaa
ggtcgtaaaggtgaccttgtatttgctttaaagcatttcatgggcaagcagatagatggt
gaaagctctcaggaattagaagagcgtgtttcctttaattctctggaaaatatttcactg
caaaagaatactaaacgtacatctgatgagagcagcgttgtaagcattaacactgtttca
gaggtttctgggtttaaacagagcaagagaaggatgaaacaatcctatgttgaggatgaa
attgtcaaagttgatactgaaatagtcacttcaaagaggaagctttcaattaaaactgat
gatcttgttactttgcctcaagctgaaccctggacagttctttcacataagaagccacag
aaagggtggattccgtataaccccagaaccatgaggcctgcacctctcactgatggaaac
tcggtgaagctaatgtcttggaatgtcaatgggttaagagcattattgaagtttgaggga
ttctctgcccttgaacttgcccaaagggaaaactttgacgtgttgtgcttgcaagagacc
aaactgcaggagaaggatgttgattccatcaaacaatgtctgatagatggttatgagaat
agcttctggacatgtagcaatgctaaacttggttattctgggactgcaattgtctctcgg
ataaagcccctttctgtctgctatggtctaggcatcccagaccatgattgtgagggacgt
gttgtgacagcagagtttgattcattttatttagtaaatacttatgttcctaacgctgga
gatggcttgaaaagactgtcgtacaggattacacaatgggatccatctcttagcaattac
atgaaagagcttgaaaagtcaaagcctgtcattttgactggtgatctgaattgtgctcac
caggagatagatatttacaatcctgcaggaaataaaagaagcgctgggtttacagaagaa
gaaaggcaatcatttgggtcaagttttttatcgaagggacttgtggataccttcagaaaa
cagcaccctaatgttgttgggtatacctactggggttatcgacatggtggacgtaaagct
aacaaaggatggcggcttgactattttcttgtgtcagaatccatagcagacaatgttcat
gactcctacattgtccctgatgttaacgggagtgatcactgtcctattggccttgttctc
aaggtttag
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