Populus euphratica (Euphrates poplar): 105131998
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Entry
105131998 CDS
T05872
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105131998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105131998
Spliceosome [BR:
peu03041
]
Common components
Common spliceosomal components
SR proteins
105131998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
105131998
NCBI-ProteinID:
XP_011033545
UniProt:
A0AAJ6URD0
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED
AIRGRDGYDFDGHRLRVELAHGGRGHSSSDRHSSYSGGRGRGGVSRRSEYRVVVTGLPSS
ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIKKLDDSEFRNAFSRAY
VRVREYDSKRDSSRSPSHGRSHSRGRSDSRGRSLSQSRSRSKSPKNKSTRRSPARSRSRS
VSRSGSRARSLSRSRSRSRSPIPSKRISKSPKKRSVSRSPRDSRSRSKSLSR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgagcgagcaggactctctatgttggaaatctgcctggcgatattcgcgag
agagaagtcgaagatttattctacaagtatggaccaattgcacacattgatctgaagatc
ccaccaagaccccctggctatgcctttgttgagtttgaagaggctcgagatgctgaggat
gcaattcgtggtcgtgatggctatgattttgatgggcatcgtttaagggtggaacttgca
catggtgggcgtggacattcatcctcagatcgtcatagtagctatagtggtggtcgtggg
cgtggtggagtatccaggcgctctgaatatcgtgttgtagtcactgggttaccttcttct
gcttcatggcaagaccttaaggatcacatgcggcgagcaggagatgtctgtttctcccaa
gtgttccgtgatggtagtggcactacaggaattgtagattacactaactatgaagacatg
aaatatgcaattaagaagcttgatgactctgagtttcgaaatgcattttctcgggcatat
gttcgtgtgagggaatatgattccaaacgggactcgtctaggagccctagtcatggtcga
tctcattctagaggccgcagcgatagccgcggtcgaagtttaagtcagagcagaagccga
agcaagtctcctaaaaacaaatctacacgtcgatcacctgcaaggtctcgatctaggtct
gtttctcgctctgggtcaagggcacgctctctatcaagatcccgttcaagatcaagatct
ccaattccatctaaacgcattagcaaaagccccaaaaagcgcagtgttagcaggagcccc
agggatagcagaagcagaagcaagagtttatcacggtga
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