Populus euphratica (Euphrates poplar): 105132007
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Entry
105132007 CDS
T05872
Name
(RefSeq) DNA mismatch repair protein PMS1 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03430
Mismatch repair
peu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105132007
03460 Fanconi anemia pathway
105132007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105132007
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105132007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105132007
NCBI-ProteinID:
XP_011033555
UniProt:
A0AAJ6UPJ4
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MESSAITIRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQ
VIDNGCGVSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRTK
NEPVATHLTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLISL
LNAYALISKGVRIVCSNTTGKNAKSVVLKTQGSDSLKDNIITVFGVNTFSCLEPVDIDIS
GSCKVEGFLSKSGQGSGRNLGDRQYFFVNGRPVDMPKVSKLVNELYKGANSRQYPIAIMN
FTIPTTACDVNVTPDKRKIFFSDESSILLALREGLEKNYSSSNSCYSVNRFENHAKAADS
SQLCSPREKSDMLSKQASANGNDSEETQTDAEDSSPLMTVEVKSKPFQVGERSIHDIEEK
FMMKDFALRLHGIKKTDSLTNSNSYKATTHLNTVTDQNAQCPSGVVERVKGGSNGPSGSF
QSKLSNFLTVNKRKREDITTQLSEVPVLRNQTSECQSKKSDIDMHDAVTSLPFNHHHIDD
STEFIGAEPPKHHSTDVIINKTRNNSGLQPKLGEDPSGEQNSSSPDDVPSITSPCKGLGN
LLEDLPVASPPAQSSVEILDAPVPFSAQQICSTLQFSFQDLHSRRMQRLSRLQSGNFTFG
GTKRSHRSYAAATLELSQPDNEERKLRALAAATTELERLFRKEDFGRMKVIGQFNLGFII
GKLDQDLFIVDQHAADEKYNFERLCQSTILNQQPLLRPLRLELSPEEEVVASMNLDIIRK
NGFALEEDPHALPGHHFKLKAVPFSKNITFGVEDVKDLISTLADSEGECSIISRYKMDTA
DSVCPSRVHAMFASRACRSSVMIGDALGRNEMQKILEHLVDLKSPWNCPHGRPTMRHLID
MSSIYERPDETEAGL
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttccgcaatcactatcaggcctataaacaaggccgctgtccacagaatctgc
gctggtcaagtgattttggacctctcatccgcagtcaaggagcttgttgaaaacagcttg
gatgctggcgctacttccatcgaaatctctttgaaagactacggcctggaatccttccag
gtcatcgataatggctgcggcgtctctcctaataatttcaaggttctggcacttaagcac
cacacctcaaaattgggggactttcatgatcttcagtctctgaccacatttggtttcaga
ggagaggcattgagttcgctttgcgtgttaggagacctcactgttgaaacaaggaccaaa
aacgagccggtggctacacacttgacttttaatcattcaggtttgttaacagccgagaga
aagacagcccgacaggttggcacgacagtcactgtcaagaagttgttttccagtttgccg
gtgcgaagcaaagaatttagccgcaacattcgcaaagaatacggaaagcttatttcttta
ttgaatgcctatgctcttatttcaaaaggcgttcgcatagtctgctctaacacaactggt
aaaaatgcaaagtctgtagtactaaaaacccaaggaagtgattcccttaaagataacatc
ataacagtgtttggtgtgaacaccttcagctgcttagagcccgtggatatagatatatca
ggcagttgcaaggttgaaggcttcctttctaagtctggtcaaggcagtggtcgcaatttg
ggtgatagacaatacttttttgtaaatggtcgaccagtggacatgcctaaagtcagcaag
ctcgtgaatgaactatacaaaggtgcaaactcccgacaatatcccatcgcaatcatgaat
ttcaccattccaactacagcgtgtgatgttaatgtgactcctgacaaaagaaaaatattc
ttttctgatgagagctctatactgcttgctctaagggagggactggaaaaaaattattct
tcaagtaattcctgttattctgttaatagatttgagaatcatgctaaggcagcagatagc
tctcagctgtgctctcctcgcgagaaatctgacatgttatcaaaacaagcatctgcaaat
ggcaatgacagtgaagaaactcaaacagatgcagaggacagcagtccactcatgacagtt
gaagtcaaatccaagccctttcaagttggagaaagatctatccatgacatcgaagaaaag
tttatgatgaaggactttgctcttagattacatggcattaagaaaactgatagtcttaca
aacagtaacagctacaaagcaacgacacatctcaatactgtgacggatcaaaatgcacaa
tgcccgtcaggagttgttgagcgagtaaaggggggttcaaatggtccttcaggctccttt
caatcaaaactcagcaattttttaactgtcaataagagaaagcgtgaagacattactaca
caattgtctgaagttcctgttctaagaaatcagacctctgaatgtcaatcgaagaaaagt
gatattgacatgcatgatgcggttacaagtcttccttttaatcatcaccacattgatgat
tctactgagtttattggtgctgagccccccaaacatcacagcacagatgtgatcatcaat
aaaacaaggaataattcaggattgcagcctaaacttggggaggatccatcaggtgagcaa
aattcatcttctcctgatgatgtcccatcaattacttccccttgcaaagggcttggaaat
ttgttagaggatcttcctgttgcctctcctccagctcaatcttccgtcgaaatattagat
gctccagtgcctttttctgcccaacagatatgctccaccttgcaatttagctttcaagac
ctgcattcaagaaggatgcagaggctgtcaaggttgcaatctggcaatttcacgtttgga
ggcacaaagagaagtcataggagctatgctgctgctacactggagctctctcaaccagac
aatgaggagcggaaattaagggctttagctgctgctacaactgagttagaaagactattc
agaaaagaagactttggtagaatgaaggtgattggtcaatttaatcttggttttatcatt
gggaaattagatcaggatttgtttatcgtggatcagcatgctgctgatgagaagtataat
tttgagagactctgtcaatcaaccattttaaaccagcagcccttgcttcggccactgagg
ctggagttatctccagaagaggaagtagttgcttcaatgaacctagacataatcagaaaa
aatggatttgctttggaagaggatccacatgcactacctgggcatcattttaaattgaaa
gctgttccttttagcaagaacataacttttggagttgaagatgtgaaggatctgatttcc
actcttgctgatagtgaaggggaatgctccataatcagtagatacaaaatggacactgct
gattccgtctgcccatcaagagttcatgcaatgtttgcatcacgtgcatgcagatcatcg
gttatgattggagatgcactagggaggaatgaaatgcagaagatacttgagcatttggtc
gatctaaagtccccctggaattgcccccatggcagaccaaccatgcgccatttgattgac
atgtcatccatttacgaaaggccagatgaaacggaagcgggcttgtga
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