Populus euphratica (Euphrates poplar): 105132155
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Entry
105132155 CDS
T05872
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03030
DNA replication
peu03410
Base excision repair
peu03420
Nucleotide excision repair
peu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105132155
03410 Base excision repair
105132155
03420 Nucleotide excision repair
105132155
03430 Mismatch repair
105132155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peu03032
]
105132155
03036 Chromosome and associated proteins [BR:
peu03036
]
105132155
03400 DNA repair and recombination proteins [BR:
peu03400
]
105132155
DNA replication proteins [BR:
peu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105132155
DNA Replication Termination Factors
ELG1-RFC complex
105132155
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105132155
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105132155
Check point factors
HRAD17(Rad24)-RFC complex
105132155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND_NTPase5
Mg_chelatase
AAA_22
Viral_helicase1
Rad17
AAA_lid_RFC1
AAA_16
RuvB_N
AAA_11
AAA_5
AAA_19
AAA_assoc_2
ABC_tran
AAA_25
nSTAND3
RCF1-5-like_lid
AAA_24
AAA_28
DNAX_ATPase_lid
IstB_IS21
MeaB
AAA_30
RNA_helicase
AAA_18
DO-GTPase1
AAA_3
bpMoxR
SLFN-g3_helicase
NTPase_1
AAA_7
KTI12
AAA_29
UvrD-helicase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
105132155
NCBI-ProteinID:
XP_011033787
UniProt:
A0AAJ6UPI1
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MASSSNSSNYDIPWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTT
SILALAHELLGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEAD
SMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMV
VVGAEQVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVK
NMVRQVLEGKFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
MRICDGVGSYLQLCGLLAKLALVRDTAKAA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcgagcaacagcagtaactacgacattccatgggtagagaaatacaggccc
agcaaagtcgctgacatcgtgggcaaccaagacgccgtctctcgcctccaagtcattgct
cgcgatggaaacatgcctaatctcattttagccggtcctcctggaactggcaaaactaca
agtatcttggctcttgcacatgagcttctgggaccaaattcaaaggaggctgtcttggag
ctgaacgcatcagatgacaggggtatagatgttgtgaggaacaaaattaagatgtttgca
caaaagaaagtgacactgcctcctggacaacacaaaattgtaattcttgatgaagcagat
agcatgacatctggagcacaacaagccctgagacgaaccatggaaatatattcaaattcc
actcggtttgctcttgcatgcaacacatcttctaaaattattgagcctattcaaagtaga
tgtgccattgttcgattttcaagattatctgatcaagagatacttggtcgtctcatggtt
gtagttggagcagagcaggtcccttacgttcctgaaggtcttgaagctattatatttact
gctgatggagatatgaggcaggccttgaacaacttgcaggctacacatagtggattccat
tttgtcaaccaggaaaatgttttcaaggtctgtgatcagcctcatccattgcatgtgaag
aatatggtgcgccaggtgcttgagggaaaatttgatgatgcttgttctggtctgaagcat
ctctatgatatgggctattcccccactgacataattacaacccttttccgaatcataaag
aattatgatatggctgaatatctgaaattggagttcatgaaggaaactgggtttgcccat
atgagaatctgcgatggtgttggttcgtatcttcagctctgtggcctgttggccaagctt
gccttagttcgtgacacagccaaagcagcataa
DBGET
integrated database retrieval system